82190-0

Herpes simplex virus 1 DNA [Presence] in Cerebrospinal Fluid by NAA with non-probe detection

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Term Description

This assay detects the presence of nucleic acid sequences from the Herpes simplex virus 1 DNA in cerebrospinal fluid (CSF) using PCR and non-probe based detection methods, such as melt curve analysis. This term was created for, but is not limited in use to, BioFire's FilmArray Meningitis/Encephalitis Panel, which is intended for the detection and identification of nucleic acids from multiple bacteria, viruses, and yeast directly from CSF obtained via lumbar puncture from individuals with signs and/or symptoms of meningitis and/or encephalitis.

Part Description

LP14821-0 Herpes simplex virus 1
Herpes simplex virus 1 and 2 (HSV-1 and HSV-2) are two species of the herpes virus family, Herpesviridae, which cause infections in humans. Eight members of herpes virus family infect humans and cause a variety of illnesses including cold sores, chickenpox or varicella, shingles or herpes zoster (VZV), cytomegalovirus (CMV). Some herpes viruses have been implicated in certain cancers and in the inflammation of the brain (encephalitis). All viruses in the herpes family produce life-long infections.
They are also called Human Herpes Virus 1 and 2 (HHV-1 and HHV-2) and are neurotropic and neuroinvasive viruses; they enter and hide in the human nervous system, accounting for their durability in the human body. HSV-1 is commonly associated with herpes outbreaks of the face known as cold sores or fever blisters, whereas HSV-2 is more often associated with genital herpes. Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details. Source: Wikipedia, Herpes simplex virus 1

LOINC Names Get Info

Fully-Specified Name: Herpes simplex virus 1 DNA:PrThr:Pt:CSF:Ord:Non-probe.amp.tar
Long Common Name: Herpes simplex virus 1 DNA [Presence] in Cerebrospinal Fluid by NAA with non-probe detection
Short Name: HSV1 DNA CSF Ql NAA+n-prb
Display Name: HSV 1 DNA NAA+non-probe Ql (CSF)
Consumer Name Alpha Get Info: Herpes simplex virus 1 (HSV 1), Spinal fluid

Part Model Get Info

Component
Herpes simplex virus 1 DNA
LP38366-8
- Analyte
  Herpes simplex virus 1 DNA
  LP38366-8
  - Component Numerator
    Herpes simplex virus 1 DNA
    LP38366-8
    - Component Numerator Core
      Herpes simplex virus 1
      LP14821-0
    - Component Numerator Core Suffix
      DNA
      LP32416-7
  - Component Denominator
    NULL
    - Component Denominator Core
      NULL
    - Component Denominator Core Suffix
      NULL
- Challenge
  NULL
- Adjustment
  NULL
- Count
  NULL
Property
PrThr
LP217195-9
Time
Pt
LP6960-1
- Time Core
  Pt
  LP6960-1
- Time Modifier
  NULL
System
CSF
LP7156-5
- System Core
  CSF
  LP7156-5
- Super System
  NULL
Scale
Ord
LP7751-3
Method
Non-probe.amp.tar
LP208998-7

Example Answer List: LL744-4

Source: Regenstrief Institute

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.56
Last Updated: Version 2.83 (MIN)
Order vs. Observation: Both
Common Test Rank Get Info: 2613

Member of these Panels

LOINC	Long Common Name
94583-2	Herpes simplex virus 1 and 2 DNA panel - Cerebrospinal Fluid by NAA with non-probe detection
82180-1	Meningitis+Encephalitis pathogens panel - Cerebrospinal Fluid by NAA with non-probe detection

Language Variants Get Info

Tag	Language	Translation
cs-CZ	Czech (Czechia)	Virus Herpes simplex 1 DNA:Přítomnost nebo práh:Časový bod:Mozkomíšní mok:Ordinální:Amplifikace nukleových kyselin s detekcí bez sondy
el-GR	Greek (Greece)	Ιός απλού έρπητα 1 DNA:PrThr:Pt:ΕΝΥ:Ord:Χωρίς ανιχνευτή.ενίσχυση.στόχου Synonyms: DNA MICRO Ord PrThr Pt Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου ΕΝΥ Ιός Ιός απλού έρπητα Ιός απλού έρπητα 1 Χωρίς ανιχνευτή.ενίσχυση.στόχου
es-ES	Spanish (Spain)	Virus Herpes simplex 1 ADN:PrThr:Punto temporal:Líquido Cefalorraquideo:Ord:Amplificación del objetivo no basado en sonda
es-MX	Spanish (Mexico)	ADN del virus del herpes simplex 1:Presencia o umbral:Punto temporal:Fluído espinal cerebral:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
fr-CA	French (Canada)	Virus de l'herpès simplex 1, ADN:Présence-Seuil:Temps ponctuel:LCR:Ordinal:Non-sonde.amplification de cible
fr-FR	French (France)	Herpes simplex virus 1 ADN:Présence/Seuil:Ponctuel:Liquide céphalorachidien:Qualitatif:Non-PCR amplification de cible
it-IT	Italian (Italy)	Herpes simplex, virus 1 DNA:PrThr:Pt:LCS:Ord:Non-sonda.amp.tar Synonyms: Amplificazione target non basata su sonda HSV HSV-1 Liquido cerebrospinale Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
pl-PL	Polish (Poland)	Wirus opryszczki pospolitej 1 DNA:granica wykrywalności:punkt w czasie:płyn mózgowo-rdzeniowy:uporządkowany:bez sondy.amplifikacja.cel Synonyms: amplifikacja kwasu nukleinowego z detekcją bez użycia sondy amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy DNA wirusa opryszczki pospolitej typu 1 Kwas deoksyrybonukleinowy Wirus opryszczki pospolitej Wirus opryszczki pospolitej typu 1
uk-UA	Ukrainian (Ukraine)	Вірус простого герпесу 1 ДНК:Наявність або Поріг:МоментЧасу:Спинномозкова рідина:Порядково:Детекція без зонда.цільова аміпліфікація НК Synonyms: 3 Self-Sustaining Sequence Replication; 3SR SR; Amplif; Amplification; Amplified; Cerebral spinal fluid; Cerebrospinal Fl; Deoxyribonucleic acid; DNA NUCLEIC ACID PROBE; DNA probe; Herp splx; Herpes simplex virus type 1; HSV; HSV1; i; ID; Infectious Disease; InfectiousDisease; LAT; LCR; Ligase chain reaction; Ligation-activated transcription; Microbiology; NAA+non-probe; NAA+probe; NAAT; NASBA; Neuro; Neurology; Nucleic acid sequence based analysis; Ordinal; PCR; Point in time; Polymerase chain reaction; PR; Probe amp; Probe with ampification; Probe with target amplification; QBR; QL; Qual; Qualitative; Random; Screen; SDA; Spinal Fl; Spinal Fld; Spinal Flu; Spinal Fluid; Strand Displacement Amplification; TMA; Transcription mediated amplification
zh-CN	Chinese (China)	单纯疱疹病毒 1 型 DNA:存在情况或阈值:时间点:脑脊液:序数型:非探针法.基因扩增.靶向 Synonyms: Ⅰ CSF CSF;脊髓液;Cerebral spinal fluid;脑脊髓液 HSV;Herpes simplex virus;单疱病毒;单疱 HSV1 DNA HSV1;单纯疱疹病毒 I 型 I 传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向借助靶向扩增的非探针方法;借助靶向扩增的非探针法;非探针法.扩增.靶向单纯疱疹病毒 I 型 DNA 去氧核糖核酸;脱氧核糖核酸去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸（Deoxyribonucleic acid，DNA）存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间经过扩增的脊液脊髓液脑脊液（Cerebral spinal fluid，CSF）脑脊髓液脱氧核糖核酸探针

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LOINC Copyright

Copyright © Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright © Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee. See https://loinc.org/license for the full LOINC copyright and license.