LOINC
Version 2.72

82780-8Borrelia miyamotoi flaB gene [Presence] in Tick by NAA with probe detectionActive

Term Description

Detection of Borrelia miyamotoi DNA in black-legged ticks helps inform the potential risk for transmission of this organism to humans; human infection must be confirmed independently through patient testing. The target for the Borrelia miyamotoi PCR assay is the conserved region within the flagellin (flaB) gene.
Source: Regenstrief LOINC

Part Description

LP221523-6   Borrelia miyamotoi flaB gene
Borrelia miyamotoi is a spirochetal bacterium that is closely related to the Borrelia species that causes tick-borne relapsing fever (TBRF), and it is more distantly related to the Borrelia species that cause Lyme disease. First identified in 1995 in ticks from Japan, B. miyamotoi has since been detected in two species of North American ticks, the black-legged or "deer" tick (Ixodes scapularis) and the western black-legged tick (Ixodes pacificus). These ticks are already known to transmit several diseases, including Lyme disease, anaplasmosis, and babesiosis. Patients with B. miyamotoi infection are most likely to have fever, chills, and headache. Other common symptoms included body and joint pain and fatigue. Unlike Lyme disease, rash is uncommon, presenting in only 4 out of 51 patients. Patients infected with B. miyamotoi have been treated with a 2-4 week course of doxycycline, amoxicillin, or ceftriaxone. Fewer than 60 well-documented cases of human infection have been reported in the United States as of July 2015. The route of transmission of B. miyamotoi to humans has not been firmly established, but likely involves the bite of infected black-legged ticks. [CDC:B. miyamotoi] The flaB gene is one of the genes that encode the core proteins for flagellin, a globular protein that forms the filament in a bacterial flagellum. [PMID:18556797] Source: Regenstrief LOINC, CDC:B. miyamotoi

Fully-Specified Name

Component
Borrelia miyamotoi flaB gene
Property
PrThr
Time
Pt
System
^Tick
Scale
Ord
Method
Probe.amp.tar

Additional Names

Short Name
B miyamotoi flaB Tick Ql NAA+probe
Display Name
B. miyamotoi flaB gene NAA+probe Ql (tick)
Consumer Name Alpha
Borrelia miyamotoi flaB gene, tick

Example Answer List LL744-4

Source: Regenstrief Institute

Answer Code Score Answer ID
Detected LA11882-0
Not detected LA11883-8

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.58
Last Updated
Version 2.63
Order vs. Observation
Both

Member of these Groups

LG41633-5 Borrelia

Language Variants Get Info

zh-CNChinese (China)
宫本疏螺旋体 flaB 基因:存在情况或阈值:时间点:^蜱:序数型:探针法.基因扩增.靶向
nl-NLDutch (Netherlands)
Borrelia miyamotoi flaB-gen:aanwezigheid:moment:^teken:ordinaal:moleculaire techniek (PCR)
fr-FRFrench (France)
Borrelia miyamotoi flaB gène:Présence/Seuil:Ponctuel:Tique:Qualitatif:PCR amplification de cible
it-ITItalian (Italy)
Borrelia miyamotoi, gene flaB:PrThr:Pt:^zecca:Ord:Sonda.amp.tar
es-MXSpanish (Mexico)
Gen flaB de Borrelia miyamotoi:Presencia o umbral:Punto temporal:^ Marque:Ordinal:Amplificación de ácidos nucleicos con detección de sonda
es-ESSpanish (Spain)
Gen flaB de Borrelia miysamotoi:PrThr:Punto temporal:^Garrapata:Ord:Sonda con amplificación dirigida

LOINC FHIR® API Example - CodeSystem Request Get Info

https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=82780-8