86593-1

Varicella zoster virus DNA [Presence] in Amniotic fluid by NAA with probe detection

Active

Part Description

LP14853-3 Varicella zoster virus
Varicella zoster virus (VZV) is a double-stranded alphaherpesvirus that causes seasonal outbreaks of chickenpox and shingles in non-immunized populations. VZV is highly infectious and is transmitted by contact with the ruptured fluid filled blisters and respiratory secretions of infected individuals. Immunity post infection is usually lifelong though the latent virus inhabits the sensory nerve ganglia where it can reactivate causing shingles when immunity declines with aging.http://jvi.asm.org/content/88/24/13936.full In the over fifty strains of VZV that have been sequenced it has been found that a single nucleotide polymorphism occurs about every 100 bases. The patterns of polymorphisms in VZV correlate with different geographical regions of infection and is the basis for the classification of viral clades.https://grose.lab.uiowa.edu/vzv-genomes-and-evolution Breuer proposed the nomenclature for the VZV clades as 1-5 with the suspected clades VI and VII to be confirmed later. The geographical regions associated with the seven clades are as follows:
Clades 1 and 3-represent the dominant clades of the circulating VZV in Europe and the Americas
Clades 4 and 5-found in Africa
Clade VI found in France, Italy
Clade VII exclusively isolated in the US
Clade 2-Asia from Korea, Japan, China not found in India, Nepal and Bangladesh where clades 4 and 5 were dominant
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5054591/ Source: Regenstrief LOINC

LOINC Names Get Info

Fully-Specified Name: Varicella zoster virus DNA:PrThr:Pt:Amnio fld:Ord:Probe.amp.tar
Long Common Name: Varicella zoster virus DNA [Presence] in Amniotic fluid by NAA with probe detection
Short Name: VZV DNA Amn Ql NAA+probe
Display Name: VZV DNA NAA+probe Ql (Amn fld)
Consumer Name Alpha Get Info: Varicella zoster virus (VZV; Chickenpox), Amniotic fluid

Part Model Get Info

Component
Varicella zoster virus DNA
LP40115-5
- Analyte
  Varicella zoster virus DNA
  LP40115-5
  - Component Numerator
    Varicella zoster virus DNA
    LP40115-5
    - Component Numerator Core
      Varicella zoster virus
      LP14853-3
    - Component Numerator Core Suffix
      DNA
      LP32416-7
  - Component Denominator
    NULL
    - Component Denominator Core
      NULL
    - Component Denominator Core Suffix
      NULL
- Challenge
  NULL
- Adjustment
  NULL
- Count
  NULL
Property
PrThr
LP217195-9
Time
Pt
LP6960-1
- Time Core
  Pt
  LP6960-1
- Time Modifier
  NULL
System
Amnio fld
LP7000-5
- System Core
  Amnio fld
  LP7000-5
- Super System
  NULL
Scale
Ord
LP7751-3
Method
Probe.amp.tar
LP6464-4

Example Answer List: LL1937-3

Source: 3M Health Information Systems

Answer	Code	Score	Answer ID
PresentCopyright http://snomed.info/sct ID:52101004 Present (qualifier value)			LA9633-4
AbsentCopyright http://snomed.info/sct ID:2667000 Absent (qualifier value)			LA9634-2

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.61
Last Updated: Version 2.63 (MIN)
Order vs. Observation: Both

Member of these Panels

LOINC	Long Common Name
95139-2	Varicella zoster virus DNA panel - Amniotic fluid by NAA with probe detection

Member of these Groups Get Info

LOINC Group	Group Name
LG32750-8	Varicella zoster virus

Language Variants Get Info

Tag	Language	Translation
cs-CZ	Czech (Czechia)	Virus Varicella zoster DNA:Přítomnost nebo práh:Časový bod:Amniová tekutina:Ordinální:Amplifikace nukleových kyselin s detekcí sondou
de-DE	German (Germany)	Varicella-Zoster-Virus DNA:Nachweis oder Schwellenwert:Zeitpunkt:Amnionflüssigkeit:Ordinal:Zielfragmentamplifikation mit Sondendetektion Synonyms: Human alphaherpesvirus 3; VZV
el-GR	Greek (Greece)	Ιός της ανεμοβλογιάς-έρπητα ζωστήρα DNA:PrThr:Pt:Αμνιακό υγρό:Ord:Ανιχνευτής.ενίσχυση.στόχου Synonyms: DNA MICRO Ord PrThr Pt Αμνιακό υγρό Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου Ιός Ιός της ανεμοβλογιάς-έρπητα ζωστήρα
es-ES	Spanish (Spain)	Virus Varicella zoster ADN:PrThr:Punto temporal:Fluido Ammiótico:Ord:Sonda con amplificación dirigida
es-MX	Spanish (Mexico)	ADN del virus de la varicela zóster:Presencia o umbral:Punto temporal:Líquido amniótico:Ordinal:Amplificación de ácidos nucleicos con detección de sonda
fr-CA	French (Canada)	Virus varicelle-zona, ADN:Présence-Seuil:Temps ponctuel:Liquide amniotique:Ordinal:Sonde avec amplification de la cible
fr-FR	French (France)	Varicelle zona virus ADN:Présence/Seuil:Ponctuel:Liquide amniotique:Qualitatif:PCR amplification de cible
fr-BE	French (Belgium)	Virus varicelle-zona ADN:PrThr:Temps ponctuel:Liquide amniotique:Ordinal:Sonde avec amplification de la cible Synonyms: VZV
it-IT	Italian (Italy)	Varicella zoster, virus DNA:PrThr:Pt:Liquido amniotico:Ord:Sonda.amp.tar Synonyms: Liquido amniotico Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus della varicella zoster
nl-NL	Dutch (Netherlands)	varicella-zostervirus DNA:aanwezigheid:moment:vruchtwater:ordinaal:probe-detectie Synonyms: probe.amp.tar Varicella zoster virus
pl-PL	Polish (Poland)	Wirus ospy wietrznej i półpaśca DNA:granica wykrywalności:punkt w czasie:płyn owodniowy:uporządkowany:sonda.amplifikacja.cel Synonyms: amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Kwas deoksyrybonukleinowy VZV
ru-RU	Russian (Russian Federation)	Varicella zoster вирус ДНК:PrThr:ТчкВрм:Амниотич ждк:Пор:Проба.усил.миш Synonyms: Амниотическая жидкость ДНК проба;ДНК зонд Порядковый Проба с мишени усилением Точка во времени;Момент
tr-TR	Turkish (Turkey)	Varicella zoster virüsü DNA:MevcEşik:Zmlı:Amniyon sv:Srl:Prob.amf.hdf Synonyms: Amniyon mayii Mevcut
zh-CN	Chinese (China)	水痘带状疱疹病毒 DNA:存在情况或阈值:时间点:羊水:序数型:探针法.基因扩增.靶向 Synonyms: HHV-3 DNA HHV-3;VZ;VZV;人类疱疹病毒 3 型;人类疱疹病毒 III 型;带状疱疹;水痘;水痘带状疱疹;水痘病毒;Varicella zoster virus;水痘-带状疱疹病毒 VZV DNA 人类疱疹病毒 3 型 DNA 人类疱疹病毒 III 型 DNA 传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向去氧核糖核酸;脱氧核糖核酸去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸（Deoxyribonucleic acid，DNA）存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间水痘病毒 DNA 经过扩增的羊膜水;胎水脱氧核糖核酸探针

LOINC Terminology Service (API) using HL7^® FHIR^® Get Info

CodeSystem lookup: https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=86593-1

Third Party Copyright

This material includes SNOMED Clinical Terms® (SNOMED CT®) which is used by permission of the International Health Terminology Standards Development Organisation (IHTSDO) under license. All rights reserved. SNOMED CT® was originally created by The College of American Pathologists. "SNOMED" and "SNOMED CT" are registered trademarks of the IHTSDO.

This material includes content from the US Edition to SNOMED CT, which is developed and maintained by the U.S. National Library of Medicine and is available to authorized UMLS Metathesaurus Licensees from the UTS Downloads site at https://uts.nlm.nih.gov.

Use of SNOMED CT content is subject to the terms and conditions set forth in the SNOMED CT Affiliate License Agreement. It is the responsibility of those implementing this product to ensure they are appropriately licensed and for more information on the license, including how to register as an Affiliate Licensee, please refer to https://www.snomed.org/get-snomed or [email protected]<mailto:[email protected]>. This may incur a fee in SNOMED International non-Member countries.

LOINC Copyright

Copyright © Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright © Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee. See https://loinc.org/license for the full LOINC copyright and license.