86620-2

Methicillin resistance mecA+mecC genes [Presence] in Nose by NAA with probe detection

Active

Term Description

Detection of the mecA or mecC gene in methicillin-resistant bacteria, specifically methicillin-resistant staphyloccus aureus (MRSA), in various clinical specimens. The result for this term detects the presence of mecA and mecC genes but does not differentiate between them. This term is based on, but not limited in use to, the submitter's Xpert® MRSA NxG assay.

Part Descriptions

LP249930-1 Bacterial methicillin resistance mecA+mecC genes
The mecA gene and its homologue, mecC, are found in bacterial cells and enable bacteria to be resistant to antibiotics such as penicillin, oxacillin and other penicillin-like antibiotics. These genes are carried on a mobile genetic element called the staphylococcal cassette chromosome mec (SCCmec), which integrates at an open reading frame (orfX) in the bacterial genome. The most commonly known carrier of the mecA gene is methicillin-resistant Staphylococcus aureus (MRSA). The prevalence of mecC MRSA is currently low but varies geographically where in some regions its presence is increasing. PMID: 24331435 Source: Regenstrief LOINC

LP265773-4 Bacterial ABXBACT probe.amp.tar
PCR-based Methods for bacterial susceptibility are similar to genotyping for viral susceptibility, in that resistance or susceptibility is inferred based on the presence or absence of specific genetic information that is known to encode resistance to a specific antibiotic or group of antibiotics. For bacteria, resistance is often conferred by genes that are carried on plasmids, which can be transferred from one species to another. These genes encode proteins that specifically inhibit certain antibiotics, such as carbapenems or aminoglycosides. Source: Regenstrief LOINC

LOINC Names Get Info

Fully-Specified Name: Bacterial methicillin resistance mecA+mecC genes:PrThr:Pt:Nose:Ord:Probe.amp.tar
Long Common Name: Methicillin resistance mecA+mecC genes [Presence] in Nose by NAA with probe detection
Short Name: mecA+mecC Nose Ql NAA+probe
Display Name: Methicillin resistance mecA+mecC genes NAA+probe Ql (Nose)
Consumer Name Alpha Get Info: Methicillin resistance mecA+mecC genes, Nose

Part Model Get Info

Component
Bacterial methicillin resistance mecA+mecC genes
LP249930-1
- Analyte
  Bacterial methicillin resistance mecA+mecC genes
  LP249930-1
  - Component Numerator
    Bacterial methicillin resistance mecA+mecC genes
    LP249930-1
    - Component Numerator Core
      Bacterial methicillin resistance mecA+mecC genes
      LP249930-1
    - Component Numerator Core Suffix
      NULL
  - Component Denominator
    NULL
    - Component Denominator Core
      NULL
    - Component Denominator Core Suffix
      NULL
- Challenge
  NULL
- Adjustment
  NULL
- Count
  NULL
Property
PrThr
LP217195-9
Time
Pt
LP6960-1
- Time Core
  Pt
  LP6960-1
- Time Modifier
  NULL
System
Nose
LP7443-7
- System Core
  Nose
  LP7443-7
- Super System
  NULL
Scale
Ord
LP7751-3
Method
Probe.amp.tar
LP6464-4

Example Answer List: LL3713-6

Source: Mercy Genesis

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8
EquivocalCopyright http://snomed.info/sct ID:42425007 Equivocal (qualifier value)			LA11885-3
InvalidCopyright http://snomed.info/sct ID:455371000124106 Invalid result (qualifier value)			LA15841-2

Basic Attributes

Class: ABXBACT
Type: Laboratory
First Released: Version 2.61
Last Updated: Version 2.64 (MIN)
Change Reason: Updated Class from "MICRO" to "ABXBACT"
Order vs. Observation: Both

Member of these Panels

LOINC	Long Common Name
104991-5	Bacterial resistance panel
86622-8	MRSA SCCmec and mecA+mecC genes panel - Nose

Language Variants Get Info

Tag	Language	Translation
cs-CZ	Czech (Czechia)	Geny mecA+mecC bakteriální rezistence na meticilin:Přítomnost nebo práh:Časový bod:Nos:Ordinální:Amplifikace nukleových kyselin s detekcí sondou
de-DE	German (Germany)	Bakterielle Methicillin-Resistenz mecA+mecC-Gene:Nachweis oder Schwellenwert:Zeitpunkt:Nase:Ordinal:Zielfragmentamplifikation mit Sondendetektion
el-GR	Greek (Greece)	Γονίδια mecA+mecC βακτηριακής ανθεκτικότητας στη μεθικιλλίνη:PrThr:Pt:Μύτη:Ord:Ανιχνευτής.ενίσχυση.στόχου Synonyms: ABXBACT Ord PrThr Pt Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου Γονίδια mecA+mecC βακτηριακής ανθεκτικότητας στη μεθικιλλίνη Μεθικιλλίνη Μύτη
es-ES	Spanish (Spain)	genes bacterianos mecA+mecC meticilin resistentes:PrThr:Punto temporal:Nariz:Ord:Sonda con amplificación dirigida
es-MX	Spanish (Mexico)	Resistencia a la meticilina bacteriana genes mecA + mecC:Presencia o umbral:Punto temporal:Nariz:Ordinal:Amplificación de ácidos nucleicos con detección de sonda
fr-FR	French (France)	Résistance bactérienne à la méticilline gènes mecA+mecC:Présence/Seuil:Ponctuel:Nez:Qualitatif:PCR amplification de cible
it-IT	Italian (Italy)	Resistenza batterica alla meticillina, geni mecA+mecC:PrThr:Pt:Naso:Ord:Sonda.amp.tar Synonyms: Geni mecA+mecC di resistenza batterica alla metici Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Suscettibilità agli antibiotici
nl-NL	Dutch (Netherlands)	bacteriële meticillineresistentie mecA + mecC-genen:aanwezigheid:moment:neus:ordinaal:probe-detectie Synonyms: probe.amp.tar
pl-PL	Polish (Poland)	Oporność bakterii na metycylinę geny mecA+mecC:granica wykrywalności:punkt w czasie:nos:uporządkowany:sonda.amplifikacja.cel Synonyms: amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Oporność bakterii na metycylinę geny mecA i mecC
zh-CN	Chinese (China)	细菌甲氧西林耐药 mecA+mecC 基因:存在情况或阈值:时间点:鼻:序数型:探针法.基因扩增.靶向 Synonyms: 2,6-二甲氧基苯青霉素;二甲氧基苯青霉素;二甲氧苯青霉素;新青霉素;甲氧苯青霉素依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向分子病理学 - 基因类基因存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）扩增型扩增性抗力抗生素敏感性试验;药敏;药敏类;药敏试验;药敏试验类抗耐性抵抗力抵抗性时刻;随机;随意;瞬间电阻细菌性细菌甲氧西林（2,6-二甲氧基苯青霉素、二甲氧基苯青霉素、二甲氧苯青霉素、新青霉素、甲氧苯青霉素）耐药（抗性、耐性、耐药性、抗药、抗药性、耐受、耐药型） mecA+mecC 基因细菌的经过扩增的耐性脱氧核糖核酸探针阻力鼻部

LOINC Terminology Service (API) using HL7^® FHIR^® Get Info

CodeSystem lookup: https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=86620-2

Third Party Copyright

This material includes SNOMED Clinical Terms® (SNOMED CT®) which is used by permission of the International Health Terminology Standards Development Organisation (IHTSDO) under license. All rights reserved. SNOMED CT® was originally created by The College of American Pathologists. "SNOMED" and "SNOMED CT" are registered trademarks of the IHTSDO.

This material includes content from the US Edition to SNOMED CT, which is developed and maintained by the U.S. National Library of Medicine and is available to authorized UMLS Metathesaurus Licensees from the UTS Downloads site at https://uts.nlm.nih.gov.

Use of SNOMED CT content is subject to the terms and conditions set forth in the SNOMED CT Affiliate License Agreement. It is the responsibility of those implementing this product to ensure they are appropriately licensed and for more information on the license, including how to register as an Affiliate Licensee, please refer to https://www.snomed.org/get-snomed or [email protected]<mailto:[email protected]>. This may incur a fee in SNOMED International non-Member countries.

LOINC Copyright

Copyright © Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright © Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee. See https://loinc.org/license for the full LOINC copyright and license.