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Part Descriptions

LP150045-5   Sequencing
Sequencing is a method used to determine the sequence of individual genes, larger genetic regions (i.e. clusters of genes or operons), full chromosomes or entire genomes. Historically, most sequencing has been performed using the chain termination method developed by Frederick Sanger in 1977. PMID: 271968 Sequencing technologies have improved dramatically, making them cheaper, faster, and more accurate. Next-generation sequencing (NGS), also known as high-throughput sequencing, deep sequencing, and second-generation sequencing, is a type of technology that uses parallel sequencing of multiple small fragments of DNA to determine sequence. This "high-throughput" technology has increased the speed and amount of DNA sequenced at a significantly reduced cost. PMID: 18576944 Several NGS platforms (ie, sequencing instruments and associated reagents) have been developed. Third-generation sequencing is another methodology currently under development that uses parallel sequencing similar to NGS. In contrast to NGS, third-generation sequencing uses single DNA molecules rather than amplified DNA as a template. PMID: 20858600 Source: Regenstrief LOINC

LP249889-9   Porcine circovirus type 2 strain
Porcine circovirus 2 (PCV2) is an important swine pathogen. PCV2 has two primary genotypes or strains, a and b. PCV2a was more predominant prior to the advent of vaccines against PCV2a, and since the vaccines were introduced, there has been a global shift in predominance from PCV2a to PCV2b. Other strains have also been identified, including PCV2c and PCV2d, and a recombinant PCV2b strain (mPCV2b). PMID: 28386278 Source: Regenstrief LOINC

LOINC Names Get Info

Fully-Specified Name
Porcine circovirus type 2 strain identified:Type:Pt:Isolate:Nom:Sequencing
Long Common Name
Porcine circovirus type 2 strain identified [Type] in Isolate by Sequencing
Short Name
PCV2 Islt Seq
Display Name
PCV type 2 strain identified Sequencing Nom (Isol)
Consumer Name Alpha Get Info
PCV type 2 strain test

Part Model Get Info

  • Component
    Porcine circovirus type 2 strain identified
    LP249725-5
    • Analyte
      Porcine circovirus type 2 strain identified
      LP249725-5
      • Component Numerator
        Porcine circovirus type 2 strain identified
        LP249725-5
        • Component Numerator Core
          Porcine circovirus type 2 strain
          LP249889-9
        • Component Numerator Core Suffix
          identified
          LP29257-0
      • Component Denominator
        NULL
         
        • Component Denominator Core
          NULL
           
        • Component Denominator Core Suffix
          NULL
           
    • Challenge
      NULL
       
    • Adjustment
      NULL
       
    • Count
      NULL
       
  • Property
    Type
    LP6886-8
  • Time
    Pt
    LP6960-1
  • System
    Isolate
    LP7370-2
    • System Core
      Isolate
      LP7370-2
    • Super System
      NULL
       
  • Scale
    Nom
    LP7750-5
  • Method
    Sequencing
    LP150045-5

Example Answer List: LL4518-8

Source: Iowa State University
AnswerCodeScoreAnswer ID
PCV2aLA27674-3
PCV2bLA27676-8
PCV2cLA27677-6
m PCV2bLA27678-4
PCV2dLA27679-2
PCV2eLA27680-0

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.63
Last Updated
Version 2.63 (ADD)
Order vs. Observation
Observation

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Prasečí cirkovirus typ 2 kmen identifikovaný:Typ:Časový bod:Izolát:Nominální:Sekvenace
el-GRGreek (Greece)Στέλεχος κυκλοϊού των χοίρων τύπου 2 αναγνωρισθέν:Type:Pt:Απομονωμένο στέλεχος:Nom:Αλληλούχιση
Synonyms: MICRO Nom Pt Type Αλληλούχιση αναγνωρισθέν Απομονωμένο στέλεχος Κυκλοϊός των χοίρων Κυκλοϊός των χοίρων τύπου 2 Στέλεχος κυκλοϊού των χοίρων τύπου 2 Των χοίρων
es-ESSpanish (Spain)Cepa circovirus porcino tipo 2 identificado:Tipo:Punto temporal:Aislado:Nom:Secuenciación
es-MXSpanish (Mexico)Se identifica la cepa de circovirus porcino tipo 2:Tipo:Punto temporal:Aislado:Nominal:Secuenciación
it-ITItalian (Italy)Circovirus suino tipo 2, variante, identificato:Tipo:Pt:Isolato:Nom:Sequenziamento
Synonyms: Microbiologia Punto nel tempo (episodio)
pl-PLPolish (Poland)Cirkowirus świński typu 2 szczep zidentyfikowany:typ:punkt w czasie:izolat:skala nominalna:sekwencjonowanie
Synonyms: Cirkowirus świński typu 2 szczep Cirkowirus świński typu 2 szczep zidentyfikowany wykryty wynik kategorialny
zh-CNChinese (China)猪圆环病毒 2 型毒株 已鉴定的:类型:时间点:分离株:名义型:序列测定
Synonyms: Ⅱ CV II PCV PCV 2 型;PCV2 分离出的;分离的;已分离的;检出的;经分离的;经过分离的;经过鉴定的;经鉴定的;鉴定的 分离物;分离菌;分离菌株;隔离种群 分类型应答;分类型结果;名义性;名称型;名词型;名词性;标称性;没有自然次序的名义型或分类型应答 圆环病毒（Circovirus，Circo virus，CV） 圆环病毒属 型 序列分析;测序 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 时刻;随机;随意;瞬间 猪圆环病毒 2 型毒株（株、分离株）;PCV 2 型毒株（株、分离株） 猪的 猪科 猪科的

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=87338-0