LOINC
Version 2.73

88891-7Human coronavirus 229E+HKU1+NL63+OC43 RNA [Presence] in Nasopharynx by NAA with non-probe detectionActive

Term Description

This assay detects nucleic acid sequences from Coronavirus subtypes 229E, HKU1, OC43, and NL63 RNA in nasopharyngeal swabs using PCR and non-probe detection methods, such as melt curve analysis. A single Coronavirus result is reported when any of the four Coronavirus subtypes are detected. This term was created for, but not limited in use to, BioFire Diagnostic FilmArray Respiratory Panel EZ assay.
Source: Regenstrief LOINC

Part Description

LP263694-4   Human coronavirus 229E+HKU1+NL63+OC43 RNA
Coronaviruses are positive-sense, single-stranded RNA viruses. The envelope of the virus has glycoprotein spikes that give it a crown-like appearance. There are six strains of coronavirus within two subgroups that infect humans. The strains of human coronaviruses that commonly infect people worldwide include 229E and NL63 in the Alpha subgroup and OC43 and HKU1 in the Beta subgroup. These viruses most often cause common cold symptoms, but can also lead to pneumonia. Severe acute respiratory syndrome coronavirus (SARS-CoV) and the Middle East Respiratory Syndrome Coronavirus (MERS-CoV) are less common but cause more severe illness.[https://www.cdc.gov/coronavirus/types.html][https://academic.oup.com/cid/article/37/7/929/422314] Source: Regenstrief LOINC

Fully-Specified Name

Component
Human coronavirus 229E+HKU1+NL63+OC43 RNA
Property
PrThr
Time
Pt
System
Nph
Scale
Ord
Method
Non-probe.amp.tar

Additional Names

Short Name
HCoV 229E+HKU1+NL63+OC43 Np Ql NAA+nonpr
Display Name
HCoV 229E+HKU1+NL63+OC43 RNA NAA+non-probe Ql (Nph)
Consumer Name Alpha
Human coronavirus 229E+HKU1+NL63+OC43, Nasopharynx

Example Answer List LL744-4

Source: Regenstrief Institute

Answer Code Score Answer ID
Detected LA11882-0
Not detected LA11883-8

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.64
Last Updated
Version 2.66
Change Reason
Updated order of analytes in Component from Human coronavirus 229E+HKU1+OC43+NL63 RNA for consistency across terms.
Order vs. Observation
Both

Member of these Panels

LOINC Long Common Name
82159-5 Respiratory pathogens DNA and RNA panel - Nasopharynx by NAA with non-probe detection

Member of these Groups

LG32771-4 Human coronavirus
LG50873-5 Human coronavirus 229E+HKU1+NL63+OC43 RNA|PrThr|Sys:ANYResp

Language Variants Get Info

zh-CNChinese (China)
人类冠状病毒 229E+HKU1+NL63+OC43 RNA:存在情况或阈值:时间点:鼻咽:序数型:非探针法.基因扩增.靶向
fr-FRFrench (France)
Coronavirus humain 229E+HKU1+NL63+OC43 ARN:Présence/Seuil:Ponctuel:Nasopharynx:Qualitatif:Non-PCR amplification de cible
it-ITItalian (Italy)
Coronavirus umano 229E+HKU1+NL63+OC43 RNA:PrThr:Pt:Nph:Ord:Non-sonda.amp.tar
es-MXSpanish (Mexico)
Coronavirus humano 229E + HKU1 + NL63 + OC43 ARN:Presencia o umbral:Punto temporal:Nasofaringe:Ordinal:Amplificación de ácidos nucleicos con detección sin sonda
es-ESSpanish (Spain)
Coronavirus Humano 229E+HKU1+NL63+OC43 RNA:PrThr:Punto temporal:Nasofaringe:Ord:Amplificación del objetivo no basado en sonda

LOINC FHIR® API Example - CodeSystem Request Get Info

https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=88891-7