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Part Descriptions

LP150045-5   Sequencing
Sequencing is a method used to determine the sequence of individual genes, larger genetic regions (i.e. clusters of genes or operons), full chromosomes or entire genomes. Historically, most sequencing has been performed using the chain termination method developed by Frederick Sanger in 1977. PMID: 271968 Sequencing technologies have improved dramatically, making them cheaper, faster, and more accurate. Next-generation sequencing (NGS), also known as high-throughput sequencing, deep sequencing, and second-generation sequencing, is a type of technology that uses parallel sequencing of multiple small fragments of DNA to determine sequence. This "high-throughput" technology has increased the speed and amount of DNA sequenced at a significantly reduced cost. PMID: 18576944 Several NGS platforms (ie, sequencing instruments and associated reagents) have been developed. Third-generation sequencing is another methodology currently under development that uses parallel sequencing similar to NGS. In contrast to NGS, third-generation sequencing uses single DNA molecules rather than amplified DNA as a template. PMID: 20858600 Source: Regenstrief LOINC

LP268093-4   Bacterial whole genome
The whole genome sequence of a microorganism isolated from a patient specimen may be used to identify the causative agent of recurrent infections and for public health and epidemiological purposes. Source: Regenstrief LOINC

LOINC Names Get Info

Fully-Specified Name
Bacterial whole genome:Seq:Pt:Isolate:Nom:Sequencing
Long Common Name
Bacterial whole genome [Nucleotide sequence] in Isolate by Sequencing
Short Name
Bacterial whole genome Islt-Seq
Display Name
Bacterial whole genome sequence Nom (Isol)
Consumer Name Alpha Get Info
Bacterial whole genome

Part Model Get Info

  • Component
    Bacterial whole genome
    LP268093-4
    • Analyte
      Bacterial whole genome
      LP268093-4
      • Component Numerator
        Bacterial whole genome
        LP268093-4
        • Component Numerator Core
          Bacterial whole genome
          LP268093-4
        • Component Numerator Core Suffix
          NULL
           
      • Component Denominator
        NULL
         
        • Component Denominator Core
          NULL
           
        • Component Denominator Core Suffix
          NULL
           
    • Challenge
      NULL
       
    • Adjustment
      NULL
       
    • Count
      NULL
       
  • Property
    Seq
    LP62164-6
  • Time
    Pt
    LP6960-1
  • System
    Isolate
    LP7370-2
    • System Core
      Isolate
      LP7370-2
    • Super System
      NULL
       
  • Scale
    Nom
    LP7750-5
  • Method
    Sequencing
    LP150045-5

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.65
Last Updated
Version 2.65 (ADD)
Order vs. Observation
Both

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Genom bakteriální úplný:Nukleotidová sekvence:Časový bod:Izolát:Nominální:Sekvenace
de-DEGerman (Germany)Bakterielles Gesamtgenom:Sequenz:Zeitpunkt:Isolat:Nominal:Sequenzierung
el-GRGreek (Greece)Ολόκληρο βακτηριακό γονιδίωμα:Seq:Pt:Απομονωμένο στέλεχος:Nom:Αλληλούχιση
Synonyms: MICRO Nom Pt Seq Αλληλούχιση Απομονωμένο στέλεχος Ολόκληρο βακτηριακό γονιδίωμα
es-ESSpanish (Spain)Genoma completo bacteriano:Secuencia de nucleótidos:Punto temporal:Aislado:Nom:Secuenciación
es-MXSpanish (Mexico)Genoma bacteriano completo:Secuencia de nucleótidos:Punto temporal:Aislado:Nominal:Secuenciación
fr-FRFrench (France)Génome bactérien:Séquence nucléotidique:Ponctuel:Isolat:Résultat nominal:Séquençage
it-ITItalian (Italy)Genoma batterico intero:Seq:Pt:Isolato:Nom:Sequenziamento
Synonyms: Microbiologia Punto nel tempo (episodio) Sequenza nucleotidica
pl-PLPolish (Poland)Cały genom bakteryjny:sekwencja nukleotydów:punkt w czasie:izolat:skala nominalna:sekwencjonowanie
Synonyms: wynik kategorialny
zh-CNChinese (China)细菌全基因组:序列:时间点:分离株:名义型:序列测定
Synonyms: 分离物;分离菌;分离菌株;隔离种群 分类型应答;分类型结果;名义性;名称型;名词型;名词性;标称性;没有自然次序的名义型或分类型应答 序列分析;测序 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 时刻;随机;随意;瞬间 核苷酸序列 细菌性 细菌的

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=90246-0