Version 2.78

92879-6 Human coronavirus 229E+HKU1+NL63+OC43 RNA [Presence] in Upper respiratory specimen by NAA with probe detection

Part Descriptions

LP263694-4   Human coronavirus 229E+HKU1+NL63+OC43 RNA
Coronaviruses are positive-sense, single-stranded RNA viruses. The envelope of the virus has glycoprotein spikes that give it a crown-like appearance. There are six strains of coronavirus within two subgroups that infect humans. The strains of human coronaviruses that commonly infect people worldwide include 229E and NL63 in the Alpha subgroup and OC43 and HKU1 in the Beta subgroup. These viruses most often cause common cold symptoms, but can also lead to pneumonia. Severe acute respiratory syndrome coronavirus (SARS-CoV) and the Middle East Respiratory Syndrome Coronavirus (MERS-CoV) are less common but cause more severe illness.[https://www.cdc.gov/coronavirus/types.html][https://academic.oup.com/cid/article/37/7/929/422314] Source: Regenstrief LOINC

Fully-Specified Name

Component
Human coronavirus 229E+HKU1+NL63+OC43 RNA
Property
PrThr
Time
Pt
System
Respiratory system specimen.upper
Scale
Ord
Method
Probe.amp.tar

Additional Names

Short Name
4 HCoVs RNA Up resp Ql NAA+probe
Display Name
HCoV 229E+HKU1+NL63+OC43 RNA NAA+probe Ql (Upper resp)
Consumer Name Alpha Get Info
Human coronavirus 229E+HKU1+NL63+OC43, Upper respiratory

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.66
Last Updated
Version 2.77
Change Reason
Release 2.77: SYSTEM: Updated to standardize the representation of "Respiratory system specimen" in the System subhierarchy across LOINC;
Order vs. Observation
Both

Example Answer List LL2021-5

Answer Code Score Answer ID
Positive Copyright http://snomed.info/sct ID:10828004 Positive (qualifier value) LA6576-8
Negative Copyright http://snomed.info/sct ID:260385009 Negative (qualifier value) LA6577-6
Invalid Copyright http://snomed.info/sct ID:455371000124106 Invalid result (qualifier value) LA15841-2

Member of these Panels

LOINC Long Common Name
92877-0 Human coronavirus 229E+HKU1+NL63+OC43 and Parainfluenza virus 1+2+3+4 RNA panel - Upper respiratory specimen by NAA with probe detection

Member of these Groups Get Info

LOINC Group Group Name
LG32771-4 Human coronavirus
LG50873-5 Human coronavirus 229E+HKU1+NL63+OC43 RNA|PrThr|Sys:ANYResp

Language Variants Get Info

Tag Language Translation
es-MX Spanish (Mexico) Coronavirus humano 229E + HKU1 + NL63 + OC43 ARN:Presencia o umbral:Punto temporal:Muestra respiratoria superior:Ordinal:Amplificación de ácidos nucleicos con detección de sonda
es-ES Spanish (Spain) Coronavirus Humano 229E+HKU1+NL63+OC43 RNA:PrThr:Punto temporal:Muestra de vías respiratorias altas:Ord:Sonda con amplificación dirigida
Synonyms: Muestra del tracto respiratorio Muestra respiratoria Tracto respiratorio
fr-FR French (France) Coronavirus humain 229E+HKU1+NL63+OC43 ARN:Présence/Seuil:Ponctuel:Voies respiratoires supérieures:Qualitatif:PCR amplification de cible
it-IT Italian (Italy) Coronavirus umano 229E+HKU1+NL63+OC43 RNA:PrThr:Pt:Campione da Sistema Respiratorio.superiore:Ord:Sonda.amp.tar
Synonyms: Campione da Apparato Respiratorio Campione da apparato respiratorio superiore HCoV Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA

92884-6 Parainfluenza virus 1+2+3+4 RNA [Presence] in Upper respiratory specimen by NAA with probe detection

Part Descriptions

LP145690-6   Parainfluenza virus 1+2+3+4
Human parainfluenza viruses (HPIVs) have been recognized as a cause of respiratory tract infections for many decades. They belong to the Paramyxoviridae family, subfamily Paramyxovirinae, and are classified into 4 serotypes. Serotype 4 can be further subdivided into 2 antigenic subtypes, HPIV-4A and HPIV-4B. Source: Centers for Disease Control and Prevention, CDC

LP145690-6   Parainfluenza virus 1+2+3+4
Parainfluenza virus is from the family Paramyxoviridae and the genera Paramyxovirus which includes the parainfluenza viruses and the mumps virus. Paramyxoviruses are particles up to 300 nm in diameter. They are spiral, tube-like symmetrical nucleocapsids which contain a monopartite, single-stranded, negative-sense RNA genome and an RNA-directed RNA polymerase. There is a matrix protein at the base of a double-layered lipid envelope which contains spikes with two glycoproteins, a viral attachment protein and a fusion protein. The viral protein spikes in parainfluenza viruses have hemagglutinating and neuraminidase activities. As all paramyxoviruses are labile, they are quickly inactivated (e.g., by heat, detergents, ultraviolet light). Primary infections occur in young children and cause mild or severe upper and lower respiratory tract infections. Reinfection is common and results in milder manifestation. Transmission is by direct contact or by droplets. Parainfluenza virus diseases are usually endemic although they can be epidemic. [NCBI Books:NBK8461] Source: Regenstrief LOINC

Fully-Specified Name

Component
Parainfluenza virus 1+2+3+4 RNA
Property
PrThr
Time
Pt
System
Respiratory system specimen.upper
Scale
Ord
Method
Probe.amp.tar

Additional Names

Short Name
HPIV 1+2+3+4 RNA Upper resp Ql NAA+probe
Display Name
Parainfluenza virus 1+2+3+4 RNA NAA+probe Ql (Upper resp)
Consumer Name Alpha Get Info
Parainfluenza virus 1+2+3+4, Upper respiratory

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.66
Last Updated
Version 2.77
Change Reason
Release 2.77: SYSTEM: Updated to standardize the representation of "Respiratory system specimen" in the System subhierarchy across LOINC;
Order vs. Observation
Both

Example Answer List LL2021-5

Answer Code Score Answer ID
Positive Copyright http://snomed.info/sct ID:10828004 Positive (qualifier value) LA6576-8
Negative Copyright http://snomed.info/sct ID:260385009 Negative (qualifier value) LA6577-6
Invalid Copyright http://snomed.info/sct ID:455371000124106 Invalid result (qualifier value) LA15841-2

Member of these Panels

LOINC Long Common Name
92877-0 Human coronavirus 229E+HKU1+NL63+OC43 and Parainfluenza virus 1+2+3+4 RNA panel - Upper respiratory specimen by NAA with probe detection

Member of these Groups Get Info

LOINC Group Group Name
LG50887-5 Parainfluenza virus 1+2+3+4 RNA|PrThr|Sys:ANYResp

Language Variants Get Info

Tag Language Translation
de-DE German (Germany) Parainfluenza-Virus 1+2+3+4 RNA:Nachweis oder Schwellenwert:Zeitpunkt:Respirationstrakt.oberer:Ordinal:Zielfragmentamplifikation mit Sondendetektion
es-MX Spanish (Mexico) Virus de la parainfluenza 1 + 2 + 3 + 4 ARN:Presencia o umbral:Punto temporal:Muestra respiratoria superior:Ordinal:Amplificación de ácidos nucleicos con detección de sonda
es-ES Spanish (Spain) Parainfluenza virus 1+2+3+4 RNA:PrThr:Punto temporal:Muestra de vías respiratorias altas:Ord:Sonda con amplificación dirigida
Synonyms: Muestra del tracto respiratorio Muestra respiratoria Tracto respiratorio
fr-FR French (France) Parainfluenza virus 1+2+3+4 ARN:Présence/Seuil:Ponctuel:Voies respiratoires supérieures:Qualitatif:PCR amplification de cible
it-IT Italian (Italy) Parainfluenza virus 1+2+3+4 RNA:PrThr:Pt:Campione da Sistema Respiratorio.superiore:Ord:Sonda.amp.tar
Synonyms: Campione da Apparato Respiratorio Campione da apparato respiratorio superiore Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Virus parainfluenzale Virus parainfluenzale di tipo 1 Virus parainfluenzale di tipo 1+2+3 Virus parainfluenzale di tipo 1+2+3+4
nl-NL Dutch (Netherlands) Para-influenzavirus 1+2+3+4 RNA:aanwezigheid:moment:bovenste luchtwegen:ordinaal:probe-detectie
Synonyms: bovenste ademhalingsstelsel; systema respiratorium superior probe.amp.tar systema respiratorium; ademhalingsstelsel