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Part Description

LP19605-2   Escherichia coli
Escherichia coli (EC) is a gram-negative, flagellated, rod-shaped bacterium. https://vetmed.iastate.edu/vdpam/FSVD/swine/index-diseases/colibacillosis The human gastrointestinal (GI) tract is colonized by EC within hours of birth. The natural barriers of the GI tract prevent infection by symbiotic EC except when they break down such as in peritonitis. EC occupy the mucous layer of the mammalian colon and is the most numerous anaerobe of the intestinal microflora. Some strains of EC have evolved virulence factors that precipitate serious disease including enteric diarrhea, urinary tract infections, sepsis and meningitis. The intestinal pathogens of EC include six pathotypes defined by the virulence factors they express. These include: enteropathogenic E. coli (EPEC), enterohaemorrhagic E. coli(EHEC), enterotoxigenic E. coli (ETEC), enteroaggregative E. coli (EAEC), enteroinvasive E. coli (EIEC) and diffusely adherent E. coli (DAEC). Uropathogenic EC (UPEC) is the most common EC infection that occurs outside the GI tract. The EC pathotypes that infects extraintestinal locations have been designated ExPEC. The EC pathotypes that infect animals and cause disease include EPEC, EHEC and ETEC.[nature.com/nrmicro/journal/v2/n2/full/nrmicro818.html][vetres.org/articles/vetres/pdf/2006/01/v6008.pdf] Source: Regenstrief LOINC

LOINC Names Get Info

Fully-Specified Name
Escherichia coli DNA:PrThr:Pt:Respiratory system specimen.lower:Ord:Probe.amp.tar
Long Common Name
Escherichia coli DNA [Presence] in Lower respiratory specimen by NAA with probe detection
Short Name
E coli DNA Lower resp Ql NAA+probe
Display Name
E. coli DNA NAA+probe Ql (Lower resp)
Consumer Name Alpha Get Info
Escherichia coli, Lower respiratory

Part Model Get Info

  • Component
    Escherichia coli DNA
    LP102592-5
    • Analyte
      Escherichia coli DNA
      LP102592-5
      • Component Numerator
        Escherichia coli DNA
        LP102592-5
        • Component Numerator Core
          Escherichia coli
          LP19605-2
        • Component Numerator Core Suffix
          DNA
          LP32416-7
      • Component Denominator
        NULL
         
        • Component Denominator Core
          NULL
           
        • Component Denominator Core Suffix
          NULL
           
    • Challenge
      NULL
       
    • Adjustment
      NULL
       
    • Count
      NULL
       
  • Property
    PrThr
    LP217195-9
  • Time
    Pt
    LP6960-1
  • System
    Respiratory system specimen.lower
    LP438102-8
    • System Core
      Respiratory system specimen.lower
      LP438102-8
    • Super System
      NULL
       
  • Scale
    Ord
    LP7751-3
  • Method
    Probe.amp.tar
    LP6464-4

Example Answer List: LL744-4

Source: Regenstrief Institute
AnswerCodeScoreAnswer ID
DetectedLA11882-0
Not detectedLA11883-8

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.68
Last Updated
Version 2.77 (MAJ)
Change Reason
Release 2.77: SYSTEM: Updated to standardize the representation of "Respiratory system specimen" in the System subhierarchy across LOINC;
Order vs. Observation
Both

Member of these Panels

LOINCLong Common Name
94393-6Respiratory pathogens DNA and RNA panel - Lower respiratory specimen by NAA with probe detection

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Escherichia coli DNA:Přítomnost nebo práh:Časový bod:Vzorek dolních cest dýchacích:Ordinální:Amplifikace nukleových kyselin s detekcí sondou
el-GRGreek (Greece)Escherichia coli (Κολοβακτηρίδιο) DNA:PrThr:Pt:Δείγμα αναπνευστικού συστήματος.κατώτερο:Ord:Ανιχνευτής.ενίσχυση.στόχου
Synonyms: DNA Escherichia coli (Κολοβακτηρίδιο) MICRO Ord PrThr Pt Αναπνευστικό Αναπνευστικό σύστημα Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου Δείγμα Δείγμα αναπνευστικού συστήματος Δείγμα αναπνευστικού συστήματος.κατώτερο
es-MXSpanish (Mexico)ADN de Escherichia coli:Presencia o umbral:Punto temporal:Muestra de vías respiratorias inferiores:Ordinal:Amplificación de ácidos nucleicos con detección de sonda
es-ESSpanish (Spain)Escherichia coli ADN:PrThr:Punto temporal:Muestra de vías respiratorias inferiores:Ord:Sonda con amplificación dirigida
Synonyms: Muestra del tracto respiratorio Muestra respiratoria Tracto respiratorio
fr-FRFrench (France)Escherichia coli ADN:Présence/Seuil:Ponctuel:Échantillon du système respiratoire inférieur:Qualitatif:PCR amplification de cible
it-ITItalian (Italy)Escherichia coli DNA:PrThr:Pt:Campione da Sistema Respiratorio.inferiore:Ord:Sonda.amp.tar
Synonyms: Campione da Apparato Respiratorio Campione da apparato respiratorio inferiore Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
nl-NLDutch (Netherlands)Escherichia coli DNA:aanwezigheid:moment:onderste luchtwegen:ordinaal:probe-detectie
Synonyms: E. coli onderste ademhalingsstelsel; systema respiratorium inferior probe.amp.tar systema respiratorium; ademhalingsstelsel
pl-PLPolish (Poland)Escherichia coli DNA:granica wykrywalności:punkt w czasie:próbka z układu oddechowego.dolna część:uporządkowany:sonda.amplifikacja.cel
Synonyms: amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Kwas deoksyrybonukleinowy próbka z dolnych dróg układu oddechowego
zh-CNChinese (China)大肠埃希菌 DNA:存在情况或阈值:时间点:呼吸系统标本.下:序数型:探针法.基因扩增.靶向
Synonyms: E coli;大肠埃希氏杆菌;大肠埃希氏菌;大肠杆菌 下 下的 下部 低级 低级的 供检查用的材料;待检物;待试验物;样品;样本;试料;试样 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 去氧核糖核酸;脱氧核糖核酸 去氧核糖核酸;脱氧核糖核酸;脱氧核糖核酸（Deoxyribonucleic acid，DNA） 受检物 呼吸系统（呼吸道）标本.下;下呼吸系统标本;下呼吸道标本 呼吸道标本（样品、样本）;呼吸系统标本（样品、样本） 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 样品 样本 经过扩增的 脱氧核糖核酸探针 试样 较低 较低的

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=94378-7