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Part Description

LP150045-5   Sequencing
Sequencing is a method used to determine the sequence of individual genes, larger genetic regions (i.e. clusters of genes or operons), full chromosomes or entire genomes. Historically, most sequencing has been performed using the chain termination method developed by Frederick Sanger in 1977. PMID: 271968 Sequencing technologies have improved dramatically, making them cheaper, faster, and more accurate. Next-generation sequencing (NGS), also known as high-throughput sequencing, deep sequencing, and second-generation sequencing, is a type of technology that uses parallel sequencing of multiple small fragments of DNA to determine sequence. This "high-throughput" technology has increased the speed and amount of DNA sequenced at a significantly reduced cost. PMID: 18576944 Several NGS platforms (ie, sequencing instruments and associated reagents) have been developed. Third-generation sequencing is another methodology currently under development that uses parallel sequencing similar to NGS. In contrast to NGS, third-generation sequencing uses single DNA molecules rather than amplified DNA as a template. PMID: 20858600 Source: Regenstrief LOINC

LOINC Names Get Info

Fully-Specified Name
Monkeypox virus lineage:Type:Pt:XXX:Nom:Sequencing
Long Common Name
Monkeypox virus lineage [Type] in Specimen by Sequencing
Short Name
MVPX lineage Spec Seq
Display Name
Monkeypox virus lineage Sequencing Nom (Specimen)
Consumer Name Alpha Get Info
Monkeypox virus lineage, Specimen

Part Model Get Info

  • Component
    Monkeypox virus lineage
    LP433765-7
    • Analyte
      Monkeypox virus lineage
      LP433765-7
      • Component Numerator
        Monkeypox virus lineage
        LP433765-7
        • Component Numerator Core
          Monkeypox virus lineage
          LP433765-7
        • Component Numerator Core Suffix
          NULL
           
      • Component Denominator
        NULL
         
        • Component Denominator Core
          NULL
           
        • Component Denominator Core Suffix
          NULL
           
    • Challenge
      NULL
       
    • Adjustment
      NULL
       
    • Count
      NULL
       
  • Property
    Type
    LP6886-8
  • Time
    Pt
    LP6960-1
  • System
    XXX
    LP7735-6
    • System Core
      XXX
      LP7735-6
    • Super System
      NULL
       
  • Scale
    Nom
    LP7750-5
  • Method
    Sequencing
    LP150045-5

Example Answer List: LL6291-0

AnswerCodeScoreAnswer ID
ALA13487-6
A.1LA33584-6
A.1.1LA33585-3
A.2LA33586-1
B.1LA33587-9
B.1.1LA33588-7
B.1.2LA33589-5
B.1.3LA33590-3
B.1.4LA33591-1
B.1.5LA33592-9
B.1.6LA33593-7
B.1.7LA33594-5
B.1.8LA33595-2
InvalidCopyright http://snomed.info/sct ID:455371000124106 Invalid result (qualifier value)LA15841-2
UnsatisfactoryLA20552-8

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.74
Last Updated
Version 2.75 (MIN)
Order vs. Observation
Both

Member of these Panels

LOINCLong Common Name
101002-4Monkeypox virus sequencing panel - Specimen by Sequencing

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Virus opičích neštovic linie:Typ:Časový bod:XXX:Nominální:Sekvenace
de-DEGerman (Germany)Affenpocken-Virus Abstammungslinie:Typ:Zeitpunkt:XXX:Nominal:Sequenzierung
el-GRGreek (Greece)Γενεαλογική σειρά του ιού ευλογιάς των πιθήκων:Type:Pt:XXX:Nom:Αλληλούχιση
Synonyms: MICRO Nom Pt Type XXX Αλληλούχιση Γενεαλογική σειρά του ιού ευλογιάς των πιθήκων Ιός Ιός ευλογιάς των πιθήκων
es-ESSpanish (Spain)Linaje del virus de la viruela del mono:Tipo:Punto temporal:XXX:Nom:Secuenciación
fr-FRFrench (France)Monkeypox virus lignée:Type:Ponctuel:Milieux divers:Résultat nominal:Séquençage
it-ITItalian (Italy)Monkeypox virus, lignaggio:Tipo:Pt:XXX:Nom:Sequenziamento
Synonyms: Lignaggio di virus Monkeypox Microbiologia Punto nel tempo (episodio)
nl-NLDutch (Netherlands)'mpox'-virus lineage:type:moment:XXX:nominaal:sequencing
Synonyms: apenpokkenvirus; MPV; monkeypoxvirus apenpokkenvirus; MPVX; ''monkeypox''-virus
pl-PLPolish (Poland)Wirus małpiej ospy linia genetyczna:typ:punkt w czasie:XXX:skala nominalna:sekwencjonowanie
Synonyms: Linia genetyczna wirusa małpiej ospy Wirus ospy małpiej wynik kategorialny
zh-CNChinese (China)猴痘病毒谱系:类型:时间点:XXX:名义型:序列测定
Synonyms: mpox 不明的;其他;将在相应消息内其他部分之中加以详细说明;未作详细说明的;未作说明的;未做说明的标本;未加规定的;未加说明的标本;杂项 传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体 分类型应答;分类型结果;名义性;名称型;名词型;名词性;标称性;没有自然次序的名义型或分类型应答 型 序列分析;测序 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 时刻;随机;随意;瞬间 猴痘病毒谱系（世系、血统、宗系、家系、种系）

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=101004-0