Version 2.78

Term Description

This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC

Part Description

LP189395-9   Bacterial 16S rRNA
Sequencing of the 16S rRNA gene is commonly used for taxonomic classification and identification of bacteria. The 16S gene is approximately 1500bp long and is universal in bacteria, allowing its relationships to be measured among all bacteria. Because it is universal among all bacteria, detection of 16S RNA can also be used to estimate bacterial load. The 16S sequence has a role in identifying bacteria that are atypical or rare that are unable to be identified by phenotypic tests alone. In general there is not enough variation in 16S sequence for its use in distinguishing strains for epidemiological purposes. Source: Regenstrief LOINC

Fully-Specified Name

Component
Bacterial 16S rRNA
Property
PrThr
Time
Pt
System
XXX
Scale
Ord
Method
Probe.amp.tar

Additional Names

Short Name
Bact 16S rRNA Spec Ql NAA+probe
Display Name
Bacterial 16S rRNA NAA+probe Ql (Specimen)
Consumer Name Alpha Get Info
Bacterial 16S, Specimen

Example Answer List: LL2994-3

Source: Bioinfomatics Research and Testing Laboratory
Answer Code Score Answer ID
Low (< 10^5 bacteria) LA21375-3
Medium (10^5-10^7 bacteria) LA21374-6
High (> 10^7 bacteria) LA21373-8

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.52
Last Updated
Version 2.78
Change Reason
Release 2.78: ORDER_OBS: Change from Obs to Both; Previous Releases: The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
Order vs. Observation
Both

Member of these Panels

LOINC Long Common Name
76586-7 ENT microorganism gene identification panel by NAA with probe detection
76585-9 Wound microorganism gene identification panel by NAA with probe detection

Language Variants Get Info

Tag Language Translation
de-AT German (Austria) Synonyms: Bakterielle 16S rRNA ql. /SM PCR
es-ES Spanish (Spain) RNA ribosomico 16S rRNA:PrThr:Punto temporal:XXX:Ord:Sonda con amplificación dirigida
es-MX Spanish (Mexico) ARNr 16S bacteriano:Presencia o umbral:Punto temporal:XXX:Ordinal:Amplificación de ácidos nucleicos con detección de sonda
fr-FR French (France) Bactérie ARNr 16S:Présence/Seuil:Ponctuel:Milieux divers:Qualitatif:PCR amplification de cible
it-IT Italian (Italy) Batteri 16S rRNA:PrThr:Pt:XXX:Ord:Sonda.amp.tar
Synonyms: Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
nl-NL Dutch (Netherlands) bacterieel 16S rRNA:aanwezigheid:moment:XXX:ordinaal:probe-detectie
Synonyms: probe.amp.tar ribosomaal RNA
tr-TR Turkish (Turkey) Bakteriyel 16S rRNA:MevcEşik:Zmlı:XXX:Srl:Prob.amf.hdf
Synonyms: Mevcut
zh-CN Chinese (China) 细菌 16S rRNA:存在情况或阈值:时间点:XXX:序数型:探针法.基因扩增.靶向
Synonyms: Gen-Probe rRNA 探针法.扩增.靶向 不明的;其他;将在相应消息内其他部分之中加以详细说明;未作详细说明的;未作说明的;未做说明的标本;未加规定的;未加说明的标本;杂项 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 基因探针 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 核糖体 RNA 探针法.基因扩增.靶向 核糖体 RNA 探针法.扩增.靶向 核糖体核糖核酸 探针法.基因扩增.靶向 核糖体核糖核酸 探针法.扩增.靶向 核糖体核糖核酸;核糖核酸 RNA 核蛋白体 RNA 核蛋白体 RNA 探针法.基因扩增.靶向 核蛋白体 RNA 探针法.扩增.靶向 核蛋白体 RNA（Ribosomal RNA，RRNA） 核蛋白体核糖核酸 核醣体 RNA 细菌性 细菌的 经过扩增的 脱氧核糖核酸探针

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CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=76575-0