76575-0

Bacterial 16S rRNA [Presence] in Specimen by NAA with probe detection

Active

Term Description

This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.

Part Description

LP189395-9 Bacterial 16S rRNA
Sequencing of the 16S rRNA gene is commonly used for taxonomic classification and identification of bacteria. The 16S gene is approximately 1500bp long and is universal in bacteria, allowing its relationships to be measured among all bacteria. Because it is universal among all bacteria, detection of 16S RNA can also be used to estimate bacterial load. The 16S sequence has a role in identifying bacteria that are atypical or rare that are unable to be identified by phenotypic tests alone. In general there is not enough variation in 16S sequence for its use in distinguishing strains for epidemiological purposes. Source: Regenstrief LOINC

LOINC Names Get Info

Fully-Specified Name: Bacterial 16S rRNA:PrThr:Pt:XXX:Ord:Probe.amp.tar
Long Common Name: Bacterial 16S rRNA [Presence] in Specimen by NAA with probe detection
Short Name: Bact 16S rRNA Spec Ql NAA+probe
Display Name: Bacterial 16S rRNA NAA+probe Ql (Specimen)
Consumer Name Alpha Get Info: Bacterial 16S, Specimen

Part Model Get Info

Component
Bacterial 16S rRNA
LP189395-9
- Analyte
  Bacterial 16S rRNA
  LP189395-9
  - Component Numerator
    Bacterial 16S rRNA
    LP189395-9
    - Component Numerator Core
      Bacterial 16S
      LP185679-0
    - Component Numerator Core Suffix
      rRNA
      LP32424-1
  - Component Denominator
    NULL
    - Component Denominator Core
      NULL
    - Component Denominator Core Suffix
      NULL
- Challenge
  NULL
- Adjustment
  NULL
- Count
  NULL
Property
PrThr
LP217195-9
Time
Pt
LP6960-1
- Time Core
  Pt
  LP6960-1
- Time Modifier
  NULL
System
XXX
LP7735-6
- System Core
  XXX
  LP7735-6
- Super System
  NULL
Scale
Ord
LP7751-3
Method
Probe.amp.tar
LP6464-4

Example Answer List: LL2994-3

Source: Bioinfomatics Research and Testing Laboratory

Answer	Code	Score	Answer ID
Low (< 10^5 bacteria)			LA21375-3
Medium (10^5-10^7 bacteria)			LA21374-6
High (> 10^7 bacteria)			LA21373-8

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.52
Last Updated: Version 2.78 (MIN)
Change Reason: Release 2.78: ORDER_OBS: Change from Obs to Both; Previous Releases: The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
Order vs. Observation: Both

Member of these Panels

LOINC	Long Common Name
76586-7	ENT microorganism gene identification panel by NAA with probe detection
76585-9	Wound microorganism gene identification panel by NAA with probe detection

Language Variants Get Info

Tag	Language	Translation
cs-CZ	Czech (Czechia)	Bakteriální 16S rRNA:Přítomnost nebo práh:Časový bod:XXX:Ordinální:Amplifikace nukleových kyselin s detekcí sondou
de-AT	German (Austria)	Synonyms: Bakterielle 16S rRNA ql. /SM PCR
el-GR	Greek (Greece)	Βακτηριακό 16S rRNA:PrThr:Pt:XXX:Ord:Ανιχνευτής.ενίσχυση.στόχου Synonyms: MICRO Ord PrThr Pt rRNA XXX Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου Βακτηριακό 16S
es-ES	Spanish (Spain)	RNA ribosomico 16S rRNA:PrThr:Punto temporal:XXX:Ord:Sonda con amplificación dirigida
es-MX	Spanish (Mexico)	ARNr 16S bacteriano:Presencia o umbral:Punto temporal:XXX:Ordinal:Amplificación de ácidos nucleicos con detección de sonda
fr-FR	French (France)	Bactérie 16S ARNr:Présence/Seuil:Ponctuel:Milieux divers:Qualitatif:PCR amplification de cible
it-IT	Italian (Italy)	Batteri 16S rRNA:PrThr:Pt:XXX:Ord:Sonda.amp.tar Synonyms: Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
nl-NL	Dutch (Netherlands)	bacterieel 16S rRNA:aanwezigheid:moment:XXX:ordinaal:probe-detectie Synonyms: probe.amp.tar ribosomaal RNA
pl-PL	Polish (Poland)	Bakteryjny 16S rRNA:granica wykrywalności:punkt w czasie:XXX:uporządkowany:sonda.amplifikacja.cel Synonyms: amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Bakteryjne 16S rRNA
tr-TR	Turkish (Turkey)	Bakteriyel 16S rRNA:MevcEşik:Zmlı:XXX:Srl:Prob.amf.hdf Synonyms: Mevcut
zh-CN	Chinese (China)	细菌 16S rRNA:存在情况或阈值:时间点:XXX:序数型:探针法.基因扩增.靶向 Synonyms: Gen-Probe rRNA 探针法.扩增.靶向不明的;其他;将在相应消息内其他部分之中加以详细说明;未作详细说明的;未作说明的;未做说明的标本;未加规定的;未加说明的标本;杂项依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型借助扩增的探针方法;借助扩增的探针法;探针法.扩增借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向基因探针存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）扩增型扩增性时刻;随机;随意;瞬间核糖体 RNA 探针法.基因扩增.靶向核糖体 RNA 探针法.扩增.靶向核糖体核糖核酸探针法.基因扩增.靶向核糖体核糖核酸探针法.扩增.靶向核糖体核糖核酸;核糖核酸 RNA 核蛋白体 RNA 核蛋白体 RNA 探针法.基因扩增.靶向核蛋白体 RNA 探针法.扩增.靶向核蛋白体 RNA（Ribosomal RNA，RRNA）核蛋白体核糖核酸核醣体 RNA 细菌性细菌的经过扩增的脱氧核糖核酸探针

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LOINC Copyright

Copyright © Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright © Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee. See https://loinc.org/license for the full LOINC copyright and license.