Version 2.78

Term Description

This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC

Part Description

LP185683-2   Enterococcus faecium sodA gene
Enterococci species are common pathogens in hospital-acquired infections, including urinary tract infections and surgical wound infections. The sodA gene is conserved across enterococcus species, but the variability of a specific internal sodA sequence can be used to differentiate between enterococcus species. A particular sodA sequence identifies Enterococcus faecium, and the identification of this sequence in a clinical specimen can be used to identify E faecium as the pathogen responsible for a particular infection. PMID: 10618129 Likewise, the cpn60 gene is conserved across many bacterial genera, but it also contains an internal sequence with enough variation to distinguish among different enterococcus species. Identification of a particular cpn60 sequence in a clinical specimen has been used to identify Enterococcus faecalis as a causative infectious organism. PMID: 11060051 Source: Regenstrief LOINC, PMID: 10618129

Fully-Specified Name

Component
Enterococcus faecium sodA gene
Property
NCnt
Time
Pt
System
XXX.tissue
Scale
Qn
Method
Probe.amp.tar

Additional Names

Short Name
E faecium sodA XXX.tiss NAA+probe
Display Name
E. faecium sodA gene NAA+probe (Unsp tissue) [#/Mass]
Consumer Name Alpha Get Info
Enterococcus faecium sodA gene, Unspecified tissue

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.52
Last Updated
Version 2.63
Order vs. Observation
Observation

Member of these Panels

LOINC Long Common Name
76585-9 Wound microorganism gene identification panel by NAA with probe detection

Language Variants Get Info

Tag Language Translation
es-ES Spanish (Spain) gen sodA Enterococcus faecium:Contenido numérico:Punto temporal:Tejido.XXX:Qn:Sonda con amplificación dirigida
Synonyms: Cuantitativo
es-MX Spanish (Mexico) Enterococo faecium sodA gen:Contenido numérico:Punto temporal:XXX.tejido:Cuantitativo:Amplificación de ácidos nucleicos con detección de sonda
fr-FR French (France) Enterococcus faecium sodA gène:Nombre/Masse:Ponctuel:Tissus divers:Numérique:PCR amplification de cible
it-IT Italian (Italy) Enterococcus faecium sodA, gene:NCnt:Pt:XXX.tessuto:Qn:Sonda.amp.tar
Synonyms: Contenuto Numerico Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Tessuto
tr-TR Turkish (Turkey) Enterococcus faecium sodA geni:Sayİçrk:Zmlı:XXX.doku:Kant:Prob.amf.hdf
zh-CN Chinese (China) 屎肠球菌 sodA 基因:计数型含量:时间点:XXX.组织:定量型:探针法.基因扩增.靶向
Synonyms: 不明的;其他;将在相应消息内其他部分之中加以详细说明;未作详细说明的;未作说明的;未做说明的标本;未加规定的;未加说明的标本;杂项 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 单位质量的数量或计数;数量/质量;数量型含量;数量或计数型含量;计数/质量;计数型含量(单位质量);数量或计数型含量(单位质量) 可用数量表示的;定量性;数值型;数量型;连续数值型标尺 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 未作说明的（此处不作说明的、不明）体系（标本、样品、样本、试样、系统）.组织 组织 经过扩增的 肠球菌属 肠道球菌 脱氧核糖核酸探针 遗传基因;遗传因子;吉恩;生物基因

Example Units

Unit Source
{#}/g Example UCUM Units

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=76594-1