Log In

Term Description

This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.

Part Description

LP185683-2   Enterococcus faecium sodA gene
Enterococci species are common pathogens in hospital-acquired infections, including urinary tract infections and surgical wound infections. The sodA gene is conserved across enterococcus species, but the variability of a specific internal sodA sequence can be used to differentiate between enterococcus species. A particular sodA sequence identifies Enterococcus faecium, and the identification of this sequence in a clinical specimen can be used to identify E faecium as the pathogen responsible for a particular infection. PMID: 10618129 Likewise, the cpn60 gene is conserved across many bacterial genera, but it also contains an internal sequence with enough variation to distinguish among different enterococcus species. Identification of a particular cpn60 sequence in a clinical specimen has been used to identify Enterococcus faecalis as a causative infectious organism. PMID: 11060051 Source: Regenstrief LOINC, PMID: 10618129

LOINC Names Get Info

Fully-Specified Name
Enterococcus faecium sodA gene:NCnt:Pt:XXX.tissue:Qn:Probe.amp.tar
Long Common Name
Enterococcus faecium sodA gene [#/mass] in XXX.tissue by NAA with probe detection
Short Name
E faecium sodA XXX.tiss NAA+probe
Display Name
E. faecium sodA gene NAA+probe (Unsp tissue) [#/Mass]
Consumer Name Alpha Get Info
Enterococcus faecium sodA gene, Unspecified tissue

Part Model Get Info

  • Component
    Enterococcus faecium sodA gene
    LP185683-2
    • Analyte
      Enterococcus faecium sodA gene
      LP185683-2
      • Component Numerator
        Enterococcus faecium sodA gene
        LP185683-2
        • Component Numerator Core
          Enterococcus faecium sodA gene
          LP185683-2
        • Component Numerator Core Suffix
          NULL
           
      • Component Denominator
        NULL
         
        • Component Denominator Core
          NULL
           
        • Component Denominator Core Suffix
          NULL
           
    • Challenge
      NULL
       
    • Adjustment
      NULL
       
    • Count
      NULL
       
  • Property
    NCnt
    LP6837-1
  • Time
    Pt
    LP6960-1
  • System
    XXX.tissue
    LP189537-6
  • Scale
    Qn
    LP7753-9
  • Method
    Probe.amp.tar
    LP6464-4

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.52
Last Updated
Version 2.63 (MIN)
Order vs. Observation
Observation

Member of these Panels

LOINCLong Common Name
76585-9Wound microorganism gene identification panel by NAA with probe detection

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Enterococcus faecium gen sodA:Početní obsah:Časový bod:XXX.tkáň:Kvantitativní:Amplifikace nukleových kyselin s detekcí sondou
el-GRGreek (Greece)Γονίδιο sodA του Enterococcus faecium (Εντερόκοκκος):NCnt:Pt:XXX.ιστός:Qn:Ανιχνευτής.ενίσχυση.στόχου
Synonyms: Enterococcus faecium (Εντερόκοκκος) MICRO NCnt Pt Qn XXX XXX.ιστός XXX>Ιστός Ανιχνευτής Ανιχνευτής.ενίσχυση Ανιχνευτής.ενίσχυση.στόχου Γονίδιο Γονίδιο sodA του Enterococcus faecium (Εντερόκοκκος) Ιστός
es-ESSpanish (Spain)gen sodA Enterococcus faecium:Contenido numérico:Punto temporal:Tejido.XXX:Qn:Sonda con amplificación dirigida
Synonyms: Cuantitativo
es-MXSpanish (Mexico)Enterococo faecium sodA gen:Contenido numérico:Punto temporal:XXX.tejido:Cuantitativo:Amplificación de ácidos nucleicos con detección de sonda
fr-FRFrench (France)Enterococcus faecium sodA gène:Nombre/Masse:Ponctuel:Tissus divers:Numérique:PCR amplification de cible
it-ITItalian (Italy)Enterococcus faecium sodA, gene:NCnt:Pt:XXX.tessuto:Qn:Sonda.amp.tar
Synonyms: Contenuto Numerico Microbiologia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA Tessuto
pl-PLPolish (Poland)Enterococcus faecium sodA gen:zawartość liczbowa:punkt w czasie:XXX.tkanka:ilościowy:sonda.amplifikacja.cel
Synonyms: amplifikacja kwasu nukleinowego z detekcją za pomocą sondy amplifikacja z detekcją za pomocą sondy Gen sodA Enterococcus faecium
tr-TRTurkish (Turkey)Enterococcus faecium sodA geni:Sayİçrk:Zmlı:XXX.doku:Kant:Prob.amf.hdf
zh-CNChinese (China)屎肠球菌 sodA 基因:计数型含量:时间点:XXX.组织:定量型:探针法.基因扩增.靶向
Synonyms: 不明的;其他;将在相应消息内其他部分之中加以详细说明;未作详细说明的;未作说明的;未做说明的标本;未加规定的;未加说明的标本;杂项 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 单位质量的数量或计数;数量/质量;数量型含量;数量或计数型含量;计数/质量;计数型含量(单位质量);数量或计数型含量(单位质量) 可用数量表示的;定量性;数值型;数量型;连续数值型标尺 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 未作说明的（此处不作说明的、不明）体系（标本、样品、样本、试样、系统）.组织 组织 经过扩增的 肠球菌属 肠道球菌 脱氧核糖核酸探针 遗传基因;遗传因子;吉恩;生物基因

Example Units

UnitSource
{#}/gExample UCUM Units

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=76594-1