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Term Description

This term was created for, but is not limited in use to, the Vysis 9q34 SpectrumAqua FISH Probe Kit, which is intended to detect deletion of the 9q34 chromosome region.

Part Descriptions

LP189751-3   9q34 chromosome region
A deletion of chromosome region 9q34 is associated with chronic myelogenous leukemia (CML). Most patients with CML have the characteristic t(9;22) (q34;q11.2) translocation that results in fusion of the BCR and ABL1 genes. A small subset of CML cases have the 9q34 deletion, which is associated with poor prognosis in CML patients under treatment with interferon therapy. PMID: 19222642 Fluorescence in situ Hybridization (FISH) is used to detect deletion of the 9q34 region around the argininosuccinate synthetase (ASS) gene. Source: Regenstrief LOINC

LP62864-1   FISH
FISH (fluorescence in situ hybridization) is a cytogenetic technique used to detect and localize the presence or absence of specific DNA sequences on chromosomes. FISH uses fluorescent probes that bind to only those parts of the chromosome with which they show a high degree of sequence similarity. Fluorescence microscopy can be used to find out where the fluorescent probe bound to the chromosomes. FISH is often used for finding specific features in DNA for use in genetic counseling, medicine, and species identification. FISH can also be used to detect and localize specific mRNAs within tissue samples. In this context, it can help define the spatial-temporal patterns of gene expression within cells and tissues. Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details. Source: Wikipedia, FISH

LOINC Names Get Info

Fully-Specified Name
9q34 chromosome region deletion:PrThr:Pt:Bld/Tiss:Ord:FISH
Long Common Name
9q34 chromosome region deletion [Presence] in Blood or Tissue by FISH
Short Name
9q34 Del Bld/T Ql FISH
Display Name
9q34 chromosome region del FISH Ql (Bld/Tiss)
Consumer Name Alpha Get Info
9q34 chromosome region deletion analysis, Blood or tissue specimen

Part Model Get Info

  • Component
    9q34 chromosome region deletion
    LP227514-9
    • Analyte
      9q34 chromosome region deletion
      LP227514-9
      • Component Numerator
        9q34 chromosome region deletion
        LP227514-9
        • Component Numerator Core
          9q34 chromosome region
          LP189751-3
        • Component Numerator Core Suffix
          deletion
          LP29253-9
      • Component Denominator
        NULL
         
        • Component Denominator Core
          NULL
           
        • Component Denominator Core Suffix
          NULL
           
    • Challenge
      NULL
       
    • Adjustment
      NULL
       
    • Count
      NULL
       
  • Property
    PrThr
    LP217195-9
  • Time
    Pt
    LP6960-1
  • System
    Bld/Tiss
    LP7061-7
    • System Core
      Bld/Tiss
      LP7061-7
    • Super System
      NULL
       
  • Scale
    Ord
    LP7751-3
  • Method
    FISH
    LP62864-1

Example Answer List: LL744-4

Source: Regenstrief Institute
AnswerCodeScoreAnswer ID
DetectedLA11882-0
Not detectedLA11883-8

Basic Attributes

Class
MOLPATH.DEL
Type
Laboratory
First Released
Version 2.54
Last Updated
Version 2.61 (MIN)
Change Reason
The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
Order vs. Observation
Both

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Chromozom 9Q34 delece:Přítomnost nebo práh:Časový bod:Krev/tkáň:Ordinální:Fluorescenční in situ hybridizace (FISH)
el-GRGreek (Greece)Χρωμοσωμική περιοχή 9q34 διαγραφή:PrThr:Pt:Αίμα/Ιστός:Ord:Φθορίζουσα υβριδοποίηση in situ
Synonyms: MOLPATH MOLPATH.DEL Ord PrThr Pt Αίμα Αίμα/Ιστός διαγραφή Ιστός Περιοχή Φθορίζουσα υβριδοποίηση in situ Χρωμόσωμα Χρωμοσωμική περιοχή Χρωμοσωμική περιοχή 9q34
es-ESSpanish (Spain)Región del cromosoma 9q34 Deleción:PrThr:Punto temporal:Sangre o tejido:Ord:Hibridación in situ fluoresente (FISH)
es-MXSpanish (Mexico)Deleción de la región del cromosoma 9q34:Presencia o umbral:Punto temporal:Sangre o tejido:Ordinal:Hibridación fluorescente in situ (FISH)
fr-FRFrench (France)Chromosome région 9q34 délétion:Présence/Seuil:Ponctuel:Sang/Tissu:Qualitatif:FISH
it-ITItalian (Italy)Regione cromosomica 9q34 Delezione:PrThr:Pt:Sangue/Tess:Ord:FISH
Synonyms: Delezione genetica Ibridazione in situ fluorescente (FISH) Patologia molecolare Presenza o Soglia Punto nel tempo (episodio) Sangue Sangue o Tessuto Tessuto & Strisci
nl-NLDutch (Netherlands)9q34-chromosoomgebied deletie:aanwezigheid:moment:bloed of weefsel:ordinaal:FISH
Synonyms: 9q34-chromosoom gebied
pl-PLPolish (Poland)Region chromosomowy 9q34 delecja:granica wykrywalności:punkt w czasie:krew lub tkanka:uporządkowany:FISH
Synonyms: Delecja prążka 34 długiego ramienia chromosomu 9 fluorescencyjna hybrydyzacja in situ
tr-TRTurkish (Turkey)9q34 Kromozom bölgesi delesyon:MevcEşik:Zmlı:Kan/Dk:Srl:FISH
Synonyms: Mevcut
zh-CNChinese (China)9q34 染色体区域 缺失:存在情况或阈值:时间点:全血/组织:序数型:FISH
Synonyms: 9q34 染色体区域（染色体部位、染色体区、染色体区带、染色体部） Fluorescent in situ hybridization;荧光原位杂交 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 全血或组织;血液/组织;血液或组织 分子病理学.基因缺失;分子病理学.缺失;分子病理学试验.基因缺失;分子病理学试验.缺失;分子病理学试验类.缺失;基因缺失;缺失 分子病理学;分子病理学试验 区;地区;局部 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 时刻;随机;随意;瞬间 未作说明的组织;组织;组织 & 涂片 染色体二体型+染色体三体型 染色体缺失;染色体区带缺失;基因缺失;缺损;基因缺损;基因删除;删除;基因丢失 染色体部位;染色体区;染色体区带;染色体部;染色体区域（染色体部位、染色体区、染色体区带、染色体部） 血;血液

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=78202-9