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Term Description

This term was created for, but is not limited in use to, the Vysis LSI Cyclin D1 (11q13) SpectrumOrange/ CEP 11 SpectrumGreen Probe Kit, which is intended for identifying a gain in copy number (duplication) of the CCND1 gene.

Part Descriptions

LP36229-0   CCND1 gene
The CCND1 gene (cyclin D1) [HGNC Gene ID:1582] is located on chromosome 11q13. The protein encoded by this gene belongs to the highly conserved cyclin family, whose members are characterized by a dramatic periodicity in protein abundance throughout the cell cycle. Cyclins function as regulators of CDK kinases. Different cyclins exhibit distinct expression and degradation patterns which contribute to the temporal coordination of each mitotic event. This cyclin forms a complex with and functions as a regulatory subunit of CDK4 or CDK6, whose activity is required for cell cycle G1/S transition. This protein has been shown to interact with tumor suppressor protein Rb and the expression of this gene is regulated positively by Rb. Mutations, amplification and overexpression of this gene, which alters cell cycle progression, are observed frequently in a variety of tumors and may contribute to tumorigenesis. [provided by RefSeq, Jul 2008] [NCBI Gene ID:595] Source: National Center for Biotechnology Information (NCBI) Gene

LP62864-1   FISH
FISH (fluorescence in situ hybridization) is a cytogenetic technique used to detect and localize the presence or absence of specific DNA sequences on chromosomes. FISH uses fluorescent probes that bind to only those parts of the chromosome with which they show a high degree of sequence similarity. Fluorescence microscopy can be used to find out where the fluorescent probe bound to the chromosomes. FISH is often used for finding specific features in DNA for use in genetic counseling, medicine, and species identification. FISH can also be used to detect and localize specific mRNAs within tissue samples. In this context, it can help define the spatial-temporal patterns of gene expression within cells and tissues. Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details. Source: Wikipedia, FISH

LOINC Names Get Info

Fully-Specified Name
CCND1 gene duplication:PrThr:Pt:Bld/Tiss:Ord:FISH
Long Common Name
CCND1 gene duplication [Presence] in Blood or Tissue by FISH
Short Name
CCND1 gene Dp Bld/T Ql FISH
Display Name
CCND1 gene dup FISH Ql (Bld/Tiss)
Consumer Name Alpha Get Info
CCND1 gene duplication analysis, Blood or tissue specimen

Part Model Get Info

  • Component
    CCND1 gene duplication
    LP227920-8
    • Analyte
      CCND1 gene duplication
      LP227920-8
      • Component Numerator
        CCND1 gene duplication
        LP227920-8
        • Component Numerator Core
          CCND1 gene
          LP36229-0
        • Component Numerator Core Suffix
          duplication
          LP36156-5
      • Component Denominator
        NULL
         
        • Component Denominator Core
          NULL
           
        • Component Denominator Core Suffix
          NULL
           
    • Challenge
      NULL
       
    • Adjustment
      NULL
       
    • Count
      NULL
       
  • Property
    PrThr
    LP217195-9
  • Time
    Pt
    LP6960-1
  • System
    Bld/Tiss
    LP7061-7
    • System Core
      Bld/Tiss
      LP7061-7
    • Super System
      NULL
       
  • Scale
    Ord
    LP7751-3
  • Method
    FISH
    LP62864-1

Example Answer List: LL744-4

Source: Regenstrief Institute
AnswerCodeScoreAnswer ID
DetectedLA11882-0
Not detectedLA11883-8

Basic Attributes

Class
MOLPATH.DELDUP
Type
Laboratory
First Released
Version 2.54
Last Updated
Version 2.61 (MIN)
Change Reason
The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
Order vs. Observation
Both

Language Variants Get Info

TagLanguageTranslation
cs-CZCzech (Czechia)Gen CCND1 duplikace:Přítomnost nebo práh:Časový bod:Krev/tkáň:Ordinální:Fluorescenční in situ hybridizace (FISH)
el-GRGreek (Greece)Γονίδιο CCND1 διπλασιασμός:PrThr:Pt:Αίμα/Ιστός:Ord:Φθορίζουσα υβριδοποίηση in situ
Synonyms: MOLPATH MOLPATH.DELDUP Ord PrThr Pt Αίμα Αίμα/Ιστός Γονίδιο Γονίδιο CCND1 διπλασιασμός Ιστός Φθορίζουσα υβριδοποίηση in situ
es-ESSpanish (Spain)Gen CCND1 Duplicación:PrThr:Punto temporal:Sangre o tejido:Ord:Hibridación in situ fluoresente (FISH)
es-MXSpanish (Mexico)Duplicación del gen CCND1:Presencia o umbral:Punto temporal:Sangre o tejido:Ordinal:Hibridación fluorescente in situ (FISH)
et-EEEstonian (Estonia)CCND1 geen duplikatsioon:PrThr:Pt:B/Tis:Ord:FISH
Synonyms: Järgarvuline Juhuslik Kude Veri Veri või koematerjal
fr-FRFrench (France)CCND1 gène duplication:Présence/Seuil:Ponctuel:Sang/Tissu:Qualitatif:FISH
it-ITItalian (Italy)CCND1, gene, duplicazione:PrThr:Pt:Sangue/Tess:Ord:FISH
Synonyms: Delezione o duplicazione genica Gene CCND1 Ibridazione in situ fluorescente (FISH) Patologia molecolare Presenza o Soglia Punto nel tempo (episodio) Sangue Sangue o Tessuto Tessuto & Strisci
nl-NLDutch (Netherlands)CCND1-gen duplicatie:aanwezigheid:moment:bloed of weefsel:ordinaal:FISH
Synonyms: CCND1 gen
pl-PLPolish (Poland)CCDN1 gen duplikacja:granica wykrywalności:punkt w czasie:krew lub tkanka:uporządkowany:FISH
Synonyms: fluorescencyjna hybrydyzacja in situ Gen CCDN1
tr-TRTurkish (Turkey)CCND1 geni dublikasyon:MevcEşik:Zmlı:Kan/Dk:Srl:FISH
Synonyms: çiftleme Mevcut
zh-CNChinese (China)CCND1 基因 复制:存在情况或阈值:时间点:全血/组织:序数型:FISH
Synonyms: B 细胞 CLL;B 细胞慢性淋巴细胞白血病;BCL1;BCL-1;D11S287E;HGNC:988;PRAD1;U21B31;慢性 B 淋巴细胞白血病;淋巴瘤 1;甲状旁腺腺上皮增生症 1;甲状旁腺腺瘤病 1;细胞周期素 D1;细胞周期蛋白 D1 Fluorescent in situ hybridization;荧光原位杂交 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 全血或组织;血液/组织;血液或组织 分子病理学;分子病理学试验 基因复制;基因重复;重复 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 时刻;随机;随意;瞬间 未作说明的组织;组织;组织 & 涂片 血;血液 遗传基因;遗传因子;吉恩;生物基因

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=78204-5