88136-7

Varicella zoster virus [Presence] in Ocular fluid by Organism specific culture

Active

Part Descriptions

LP14853-3 Varicella zoster virus
Varicella zoster virus (VZV) is a double-stranded alphaherpesvirus that causes seasonal outbreaks of chickenpox and shingles in non-immunized populations. VZV is highly infectious and is transmitted by contact with the ruptured fluid filled blisters and respiratory secretions of infected individuals. Immunity post infection is usually lifelong though the latent virus inhabits the sensory nerve ganglia where it can reactivate causing shingles when immunity declines with aging.http://jvi.asm.org/content/88/24/13936.full In the over fifty strains of VZV that have been sequenced it has been found that a single nucleotide polymorphism occurs about every 100 bases. The patterns of polymorphisms in VZV correlate with different geographical regions of infection and is the basis for the classification of viral clades.https://grose.lab.uiowa.edu/vzv-genomes-and-evolution Breuer proposed the nomenclature for the VZV clades as 1-5 with the suspected clades VI and VII to be confirmed later. The geographical regions associated with the seven clades are as follows:
Clades 1 and 3-represent the dominant clades of the circulating VZV in Europe and the Americas
Clades 4 and 5-found in Africa
Clade VI found in France, Italy
Clade VII exclusively isolated in the US
Clade 2-Asia from Korea, Japan, China not found in India, Nepal and Bangladesh where clades 4 and 5 were dominant
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5054591/ Source: Regenstrief LOINC

LP6429-7 Organism specific culture
An organism-specific culture contains nutrients that optimize the growth of a specific organism and inhibitors that prevent the growth of competing organisms. Source: Regenstrief LOINC

LP7448-6 Ocular fld
The "Ocular fld" System in LOINC encompasses aqueous humor and vitreous humor. Aqueous humor is found in the anterior and posterior chambers of the eye, both of which are located anterior to the lens. Vitreous humor is found in the vitreous chamber, which is located between the lens and the retina. This System is used for LOINC terms that represent tests run on either aqueous or vitreous fluid; it does not imply that both types of fluid are tested in any given instance. Source: Regenstrief LOINC

LOINC Names Get Info

Fully-Specified Name: Varicella zoster virus:PrThr:Pt:Ocular fld:Ord:Organism specific culture
Long Common Name: Varicella zoster virus [Presence] in Ocular fluid by Organism specific culture
Short Name: VZV Ocflu Ql Cult
Display Name: VZV Org specific cx Ql (Ocular fluid)
Consumer Name Alpha Get Info: Varicella zoster virus (VZV; Chickenpox) culture, Eye fluid

Part Model Get Info

Component
Varicella zoster virus
LP14853-3
- Analyte
  Varicella zoster virus
  LP14853-3
  - Component Numerator
    Varicella zoster virus
    LP14853-3
    - Component Numerator Core
      Varicella zoster virus
      LP14853-3
    - Component Numerator Core Suffix
      NULL
  - Component Denominator
    NULL
    - Component Denominator Core
      NULL
    - Component Denominator Core Suffix
      NULL
- Challenge
  NULL
- Adjustment
  NULL
- Count
  NULL
Property
PrThr
LP217195-9
Time
Pt
LP6960-1
- Time Core
  Pt
  LP6960-1
- Time Modifier
  NULL
System
Ocular fld
LP7448-6
- System Core
  Ocular fld
  LP7448-6
- Super System
  NULL
Scale
Ord
LP7751-3
Method
Organism specific culture
LP6429-7

Example Answer List: LL744-4

Source: Regenstrief Institute

Answer	Code	Score	Answer ID
Detected			LA11882-0
Not detected			LA11883-8

Basic Attributes

Class: MICRO
Type: Laboratory
First Released: Version 2.63
Last Updated: Version 2.63 (ADD)
Order vs. Observation: Both

Member of these Groups Get Info

LOINC Group	Group Name
LG32750-8	Varicella zoster virus
LG50923-8	Varicella zoster virus\|PrThr\|Sys:ANYEYE

Language Variants Get Info

Tag	Language	Translation
cs-CZ	Czech (Czechia)	Virus Varicella zoster:Přítomnost nebo práh:Časový bod:Oční tekutina:Ordinální:Kultivace specifická pro daný organismus
el-GR	Greek (Greece)	Ιός της ανεμοβλογιάς-έρπητα ζωστήρα:PrThr:Pt:Οφθαλμικό υγρό:Ord:Ειδική καλλιέργεια οργανισμού Synonyms: MICRO Ord PrThr Pt Ειδική καλλιέργεια οργανισμού Ιός Ιός της ανεμοβλογιάς-έρπητα ζωστήρα Καλλιέργεια Οφθαλμικό υγρό
es-ES	Spanish (Spain)	Virus Varicella zoster:PrThr:Punto temporal:Fluido ocular:Ord:Cultivos especíificos
es-MX	Spanish (Mexico)	Virus de la varicela zoster:Presencia o umbral:Punto temporal:Fluido ocular:Ordinal:Cultivo específico del organismo
fr-CA	French (Canada)	Virus varicelle-zona:Présence-Seuil:Temps ponctuel:Liquide oculaire:Ordinal:Culture spécifique à un microorganisme
fr-FR	French (France)	Varicelle zona virus:Présence/Seuil:Ponctuel:Liquide oculaire:Qualitatif:Culture spécifique
fr-BE	French (Belgium)	Virus varicelle-zona:PrThr:Temps ponctuel:Liquide oculaire:Ordinal:Culture spécifique de microorganisme Synonyms: VZV
it-IT	Italian (Italy)	Varicella zoster, virus:PrThr:Pt:Liquido oculare:Ord:Organismo, coltura specifica Synonyms: Coltura specifica di un organismo Liquido oculare Microbiologia Presenza o Soglia Punto nel tempo (episodio) Virus della varicella zoster
nl-NL	Dutch (Netherlands)	varicella-zostervirus:aanwezigheid:moment:oogvocht:ordinaal:organisme-specifieke kweek Synonyms: Varicella zoster virus
pl-PL	Polish (Poland)	Wirus ospy wietrznej i półpaśca:granica wykrywalności:punkt w czasie:płyn oczny:uporządkowany:hodowla specyficzna dla organizmu Synonyms: VZV
ru-RU	Russian (Russian Federation)	Varicella zoster вирус:PrThr:ТчкВрм:Глазная ждк:Пор:Культура специфичного оранизма Synonyms: Порядковый Точка во времени;Момент
tr-TR	Turkish (Turkey)	Varicella zoster virüsü:MevcEşik:Zmlı:Oküler sv:Srl:Etken spesifik kültür Synonyms: Mevcut Organizma spesifik kültür
zh-CN	Chinese (China)	水痘带状疱疹病毒:存在情况或阈值:时间点:眼液:序数型:微生物特异性培养 Synonyms: HHV-3;VZ;VZV;人类疱疹病毒 3 型;人类疱疹病毒 III 型;带状疱疹;水痘;水痘带状疱疹;水痘病毒;Varicella zoster virus;水痘-带状疱疹病毒传染毒;传染毒素;滤过性病原体;病毒类;过滤性病原体依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型培养方法存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值）微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体）时刻;随机;随意;瞬间特异特异性的特异的生物特异性培养

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LOINC Copyright

Copyright © Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright © Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee. See https://loinc.org/license for the full LOINC copyright and license.