92907-5

MET gene copy number/Chromosome 7 copy number in Blood or Tissue by FISH

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Part Descriptions

LP343942-1 MET gene copy number
MET gene amplification studies evaluate the number of copies of the MET gene present in a single cell. Amplification is determined based on the MET gene copy number and MET to centromere ratio. Different criteria have been proposed for what constitutes amplification, including a MET to centromere ratio of >= 2, an average MET gene copy number >=5, and at least 15 gene copies in 10% of the tumor cell nuclei that were counted. MET amplification is associated with worse prognosis in a variety of cancers, including non-small cell lung and gastroesophageal cancer. PMID: 27926778 Source: Regenstrief LOINC

LP343942-1 MET gene copy number
The ratio of MET signals per nucleus to chromosome 7 signals per nucleus is used to determine if MET gene amplification has occurred. MET amplification is a biomarker for different types of cancer, including non-small cell lung cancer. Source: Regenstrief LOINC

LP343944-7 Chromosome 7 copy number
Aneusomy (varying number) of chromosome 7 is evaluated by using a DNA probe that marks the centromeric region of chromosome 7. Such a probe is also called CEP7. The ratio of the number of signals of the MET gene, also on chromosome 7, to the chromosome 7 signal can indicate whether or not there is amplification of the MET gene. Source: Regenstrief LOINC

LP62864-1 FISH
FISH (fluorescence in situ hybridization) is a cytogenetic technique used to detect and localize the presence or absence of specific DNA sequences on chromosomes. FISH uses fluorescent probes that bind to only those parts of the chromosome with which they show a high degree of sequence similarity. Fluorescence microscopy can be used to find out where the fluorescent probe bound to the chromosomes. FISH is often used for finding specific features in DNA for use in genetic counseling, medicine, and species identification. FISH can also be used to detect and localize specific mRNAs within tissue samples. In this context, it can help define the spatial-temporal patterns of gene expression within cells and tissues. Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details. Source: Wikipedia, FISH

LOINC Names Get Info

Fully-Specified Name: MET gene copy number/Chromosome 7 copy number:NRto:Pt:Bld/Tiss:Qn:FISH
Long Common Name: MET gene copy number/Chromosome 7 copy number in Blood or Tissue by FISH
Short Name: MET copy num/Chr 7 copy num Bld/T FISH
Display Name: MET copy num/Chr 7 copy num FISH (Bld/Tiss) [# ratio]
Consumer Name Alpha Get Info: MET copy number/Chromosome 7 Copy Number, Blood or tissue specimen

Part Model Get Info

Component
MET gene copy number/Chromosome 7 copy number
LP406709-8
- Analyte
  MET gene copy number/Chromosome 7 copy number
  LP406709-8
  - Component Numerator
    MET gene copy number
    LP343942-1
    - Component Numerator Core
      MET gene copy number
      LP343942-1
    - Component Numerator Core Suffix
      NULL
  - Component Denominator
    Chromosome 7 copy number
    LP343944-7
    - Component Denominator Core
      Chromosome 7 copy number
      LP343944-7
    - Component Denominator Core Suffix
      NULL
- Challenge
  NULL
- Adjustment
  NULL
- Count
  NULL
Property
NRto
LP6840-5
Time
Pt
LP6960-1
- Time Core
  Pt
  LP6960-1
- Time Modifier
  NULL
System
Bld/Tiss
LP7061-7
- System Core
  Bld/Tiss
  LP7061-7
- Super System
  NULL
Scale
Qn
LP7753-9
Method
FISH
LP62864-1

Basic Attributes

Class: MOLPATH
Type: Laboratory
First Released: Version 2.66
Last Updated: Version 2.66 (ADD)
Order vs. Observation: Observation

Language Variants Get Info

Tag	Language	Translation
cs-CZ	Czech (Czechia)	Gen MET počet kopií/Chromozom 7počet kopií:Početní poměr:Časový bod:Krev/tkáň:Kvantitativní:Fluorescenční in situ hybridizace (FISH)
el-GR	Greek (Greece)	Αριθμός αντιγράφων γονιδίου MET/Αριθμός αντιγράφων χρωμοσώματος 7:NRto:Pt:Αίμα/Ιστός:Qn:Φθορίζουσα υβριδοποίηση in situ Synonyms: MOLPATH NRto Pt Qn Αίμα Αίμα/Ιστός Αριθμός Αριθμός αντιγράφων γονιδίου MET Αριθμός αντιγράφων χρωμοσώματος 7 Γονίδιο Γονίδιο MET Ιστός Φθορίζουσα υβριδοποίηση in situ Χρωμόσωμα
es-ES	Spanish (Spain)	Número de copia del gen MET/Número de copias del cromosoma 7:Relación de número:Punto temporal:Sangre o tejido:Qn:Hibridación in situ fluoresente (FISH) Synonyms: Cuantitativo
es-MX	Spanish (Mexico)	Número de copia del gen MET / número de copia del cromosoma 7:Proporción numérica:Punto temporal:Sangre o tejido:Cuantitativo:Hibridación fluorescente in situ (FISH)
fr-FR	French (France)	MET gène nombre de copie/chromosome 7 nombre de copie:Nombre/Nombre:Ponctuel:Sang/Tissu:Numérique:FISH
it-IT	Italian (Italy)	MET, numero copia del gene/Cromosoma 7, numero copia:NRto:Pt:Sangue/Tess:Qn:FISH Synonyms: Gene MET Ibridazione in situ fluorescente (FISH) Numero copia del cromosoma 7 Numero copia del gene MET Patologia molecolare Punto nel tempo (episodio) Rapporto numerico Sangue Sangue o Tessuto Tessuto & Strisci
nl-NL	Dutch (Netherlands)	aantal kopieën van MET-gen/aantal centromeren van chromosoom 7:aantalsverhouding:moment:bloed of weefsel:kwantitatief:FISH Synonyms: CEP7 MET
pl-PL	Polish (Poland)	MET gen liczba kopii/liczba kopii chromosomu 7:współczynnik liczbowy:punkt w czasie:krew lub tkanka:ilościowy:FISH Synonyms: fluorescencyjna hybrydyzacja in situ Gen MET Liczba kopii genu MET
zh-CN	Chinese (China)	MET 基因拷贝数/染色体 7 拷贝数:计数型比率:时间点:全血/组织:定量型:FISH Synonyms: Fluorescent in situ hybridization;荧光原位杂交 MET 基因拷贝（副本）数（数量、计数）个数;数目全血或组织;血液/组织;血液或组织分子病理学;分子病理学试验可用数量表示的;定量性;数值型;数量型;连续数值型标尺同一样本内两种不同实体的数量之比;数量型比;数量型比值;数量型比率;数量或计数型比;数量或计数型比值;计数型比;计数型比值;数量或计数型比率时刻;随机;随意;瞬间未作说明的组织;组织;组织 & 涂片染色体 7 （7号染色体）拷贝（副本）数（数量、计数）;7号染色体拷贝数染色体二体型+染色体三体型血;血液遗传基因;遗传因子;吉恩;生物基因

Example Units

Unit	Source
{ratio}	Example UCUM Units

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LOINC Copyright

Copyright © Regenstrief Institute, Inc. All Rights Reserved. To the extent included herein, the LOINC table and LOINC codes are copyright © Regenstrief Institute, Inc. and the Logical Observation Identifiers Names and Codes (LOINC) Committee. See https://loinc.org/license for the full LOINC copyright and license.