Version 2.78

Term Description

This term was created for, but is not limited in use to, Pathogenius Laboratories' Level 1 Wound and/or ENT test panels, which use quantitative PCR to identify commonly-found microorganisms in wound or ear, nose, and throat samples, respectively.
Source: Regenstrief LOINC

Part Description

LP185686-5   Streptococcus pyogenes csrS gene
Streptococcus pyogenes is an important cause of pharyngitis as well as more severe infections, including sepsis and toxic shock syndrome. The csrS gene is associated with S pyogenes virulence, and therefore, its presence in clinical specimens can be used to identify this organism as one of the pathogens responsible for a specific infection. PMID: 21371090 Source: Regenstrief LOINC, PMID: 21371090

Fully-Specified Name

Component
Streptococcus pyogenes csrS gene
Property
PrThr
Time
Pt
System
XXX.swab
Scale
Ord
Method
Probe.amp.tar

Additional Names

Short Name
S pyogenes csrS Swab Ql NAA+probe
Display Name
S. pyogenes csrS gene NAA+probe Ql (Swab specimen)
Consumer Name Alpha Get Info
Streptococcus pyogenes csrS gene, Swab specimen

Example Answer List: LL2994-3

Source: Bioinfomatics Research and Testing Laboratory
Answer Code Score Answer ID
Low (< 10^5 bacteria) LA21375-3
Medium (10^5-10^7 bacteria) LA21374-6
High (> 10^7 bacteria) LA21373-8

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.52
Last Updated
Version 2.71
Change Reason
The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.
Order vs. Observation
Observation

Member of these Panels

LOINC Long Common Name
76586-7 ENT microorganism gene identification panel by NAA with probe detection
76585-9 Wound microorganism gene identification panel by NAA with probe detection

Member of these Groups Get Info

LOINC Group Group Name
LG41610-3 Streptococcus pyogenes

Language Variants Get Info

Tag Language Translation
de-DE German (Germany) Streptococcus pyogenes csrS-Gen:Nachweis oder Schwellenwert:Zeitpunkt:XXX.Abstrich:Ordinal:Zielfragmentamplifikation mit Sondendetektion
es-ES Spanish (Spain) gen csrS Streptococcus pyogenes:PrThr:Punto temporal:Escobillon XXX:Ord:Sonda con amplificación dirigida
es-MX Spanish (Mexico) Gen csrS de Streptococo pyogenes:Presencia o umbral:Punto temporal:XXX.swab:Ordinal:Amplificación de ácidos nucleicos con detección de sonda
fr-FR French (France) Streptococcus pyogenes csrS gène:Présence/Seuil:Ponctuel:Prélèvement divers:Qualitatif:PCR amplification de cible
it-IT Italian (Italy) Streptococcus pyogenes, gene csrS:PrThr:Pt:XXX.tampone:Ord:Sonda.amp.tar
Synonyms: Gene csrs di Streptococcus pyogenes Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA
tr-TR Turkish (Turkey) Streptococcus pyogenis csrS geni:MevcEşik:Zmlı:XXX.sürüntü:Srl:Prob.amf.hdf
Synonyms: Mevcut
zh-CN Chinese (China) 化脓性链球菌 csrS 基因:存在情况或阈值:时间点:XXX.拭子:序数型:探针法.基因扩增.靶向
Synonyms: A 族链球菌 csrS 基因;A 组链球菌 csrS 基因;A 群链球菌 csrS 基因;产脓链球菌 csrS 基因;酿脓链球菌 csrS 基因 A 族链球菌;A 组链球菌;Group A Streptococcus;GAS;A 群链球菌;GAS;产脓链球菌;酿脓链球菌 XXX.拭子（拭样、采样刷、样品刷、药签、棉签）;未作说明的（此处不作说明的、不明）体系（标本、样品、样本、试样、系统）.拭子 不明的;其他;将在相应消息内其他部分之中加以详细说明;未作详细说明的;未作说明的;未做说明的标本;未加规定的;未加说明的标本;杂项 依次型;分类顺序型;定性的;序数型（或称等级型）;性质上的;有序型;有序性分类应答;有序性分类结果;秩次型;等级型;筛查;顺序型 借助扩增的探针方法;借助扩增的探针法;探针法.扩增 借助靶向扩增的探针方法;借助靶向扩增的探针法;探针法.扩增.靶向 存在情况;存在;存在与否;是否存在;阈值;界值;界限;阀值;临界值;存在情况（存在、存在与否、是否存在）或阈值（界值、界限、阀值、临界值） 微生物学;微生物学试验;微生物学试验（培养、DNA、抗原及抗体） 扩增型 扩增性 时刻;随机;随意;瞬间 经过扩增的 脱氧核糖核酸探针 遗传基因;遗传因子;吉恩;生物基因

LOINC Terminology Service (API) using HL7® FHIR® Get Info

CodeSystem lookup
https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=76581-8