LOINC
Version 2.71

96752-1SARS-CoV-2 (COVID-19) S gene mutation [Presence] in Specimen by Molecular genetics methodActive

Term Description

This term is used to report whether a known mutation was detected within the S (spike) gene of SARS coronavirus 2 (SARS-CoV-2) by molecular methods. To report the mutation found, use [LOINC:96751-3]. For reporting the SARS-CoV-2 variant strain identified, various codes are available in LOINC depending on the nomenclature used. For the most general code (nomenclature unspecified), use SARS-CoV-2 (COVID-19) variant [Type] in Specimen [LOINC:96741-4]. To report the lineage for the variant, use SARS-CoV-2 (COVID-19) lineage [Type] in Specimen [LOINC:96895-8]. To report the clade for the variant, use SARS-CoV-2 (COVID-19) clade [Type] in Specimen [LOINC:96896-6].
Source: Regenstrief LOINC

Fully-Specified Name

Component
SARS coronavirus 2 S gene mutation
Property
PrThr
Time
Pt
System
XXX
Scale
Ord
Method
Molgen

Additional Names

Short Name
SARS-CoV-2 S gene mut Spec Ql
Display Name
SARS-CoV-2 (COVID-19) S gene mutation Molgen Ql (Specimen)
Consumer Name Alpha
SARS-CoV-2 (COVID-19) S gene mutation, Specimen

Example Answer List LL744-4

Source: Regenstrief Institute

Answer Code Score Answer ID
Detected LA11882-0
Not detected LA11883-8

Basic Attributes

Class
MICRO
Type
Laboratory
First Released
Version 2.70
Last Updated
Version 2.70
Order vs. Observation
Observation

Member of these Panels

LOINC Long Common Name
96894-1 SARS-CoV-2 (COVID-19) sequencing and identification panel - Specimen by Molecular genetics method

Member of these Groups

LG51017-8 SARSCoV2 detection

Language Variants Get Info

nl-NLDutch (Netherlands)
SARS-CoV-2 S-genmutatie:aanwezigheid:moment:XXX:ordinaal:moleculair genetisch onderzoek
it-ITItalian (Italy)
SARS coronavirus 2, mutazione del gene S:PrThr:Pt:XXX:Ord:Molgen

LOINC FHIR® API Example - CodeSystem Request Get Info

https://fhir.loinc.org/CodeSystem/$lookup?system=http://loinc.org&code=96752-1