97608-4
Joint pathogens panel - Synovial fluid by NAA with non-probe detection
Active
97609-2 Anaerococcus prevotii+vaginalis DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP426548-6 Anaerococcus prevotii+vaginalis
Anaerococcus prevotii and vaginalis are two species in the genus Anaerococcus, and were previously classified under the genus Peptostreptococcus. Anaerococcus species are Gram positive anaerobic bacteria and can be found as part of normal flora on the skin, mouth, and gastrointestinal tract. They have been identified as pathogens in skin and soft tissue infections as well as diabetic foot and pressure ulcers, bone and joint infections, abscesses in various locations, and blood infections. PMID: 23030831
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Anaerococcus prevotii+vaginalis DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- A prev+vag DNA Snv Ql NAA+non-probe
- Display Name
- A. prevotii+vaginalis DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Anaerococcus prevotii and vaginalis, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Anaerococcus prevotii/vaginalis DNA ql. /PG |
| es-ES | Spanish (Spain) | Anaerococcus prevotii+vaginalis ADN: |
| es-MX | Spanish (Mexico) | ADN de Anaerococcus prevotii + vaginalis: |
| fr-FR | French (France) | Anaerococcus prevotii+vaginalis ADN: |
| it-IT | Italian (Italy) | Anaerococcus prevotii+vaginalis DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 普氏厌氧球菌+阴道厌氧球菌 DNA: Synonyms: 依次型; |
97610-0 Bacteroides fragilis DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP16785-5 Bacteroides fragilis
Gram-negative bacteria occurring in the lower intestinal tracts of man and other animals. It is the most common species of anaerobic bacteria isolated from human soft tissue infections.
Source: National Library of Medicine, MeSH 2006
Fully-Specified Name
- Component
- Bacteroides fragilis DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- B fragilis DNA Snv Ql NAA+non-probe
- Display Name
- B. fragilis DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Bacteroides fragilis, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Bacteroides fragilis DNA ql. /PG |
| es-ES | Spanish (Spain) | Bacteroides fragilis ADN: |
| es-MX | Spanish (Mexico) | ADN de Bacteroides fragilis: |
| fr-CA | French (Canada) | Bacteroides fragilis, ADN: |
| fr-FR | French (France) | Bacteroides fragilis ADN: |
| it-IT | Italian (Italy) | Bacteroides fragilis DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 脆弱类杆菌 DNA: Synonyms: 依次型; |
97611-8 Candida albicans DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP140223-1 Candida albicans DNA
Candida albicans is a diploid yeast of the genus Candida. Systemic fungal infections, including those by C. albicans, have emerged as important causes of morbidity and mortality in immunocompromised patients (e.g., HIV, cancer chemotherapy, organ or bone marrow transplantation). C. albicans represents nearly half of clinical isolates of the Candida genus, and hospital-acquired infections by this organism have become a major health concern. The genome of C. albicans is highly dynamic due to frequent karyotypic alterations, which cause changes in its phenotype and successful adaptation.
Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details.
Source: Wikipedia, Candida albicans (Wikipedia)
LP16676-6 Candida albicans
Candida albicans is a diploid yeast of the genus Candida. Systemic fungal infections, including those by C. albicans, have emerged as important causes of morbidity and mortality in immunocompromised patients (e.g., HIV, cancer chemotherapy, organ or bone marrow transplantation). C. albicans represents nearly half of clinical isolates of the Candida genus, and hospital-acquired infections by this organism have become a major health concern. The genome of C. albicans is highly dynamic due to frequent karyotypic alterations, which cause changes in its phenotype and successful adaptation.
Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details.
Source: Wikipedia, Candida albicans (Wikipedia)
Fully-Specified Name
- Component
- Candida albicans DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- C albicans DNA Snv Ql NAA+non-probe
- Display Name
- C. albicans DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Candida albicans, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Candida albicans DNA ql. /PG |
| es-ES | Spanish (Spain) | Candida albicans ADN: |
| es-MX | Spanish (Mexico) | ADN de Candida albicans: |
| fr-CA | French (Canada) | Candida albicans, ADN: |
| fr-FR | French (France) | Candida albicans ADN: |
| it-IT | Italian (Italy) | Candida albicans DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 白色假丝酵母 DNA: Synonyms: 丛梗孢属; |
97612-6 Candida sp DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP14808-7 Candida sp
Systemic candidiasis is an invasive yeast infection caused primarily by C. albicans, although other Candida species can also be the cause. It leads to septicemia, endocarditis, meningitis, and rarely as osteomyelitis. Superficial candidiasis is common, but generally only immunocompromised patients have systemic candidiasis. Because Candida species are common contaminants, diagnosis is difficult and requires the elimination of other possible causes.
Source: Regenstrief Institute
Fully-Specified Name
- Component
- Candida sp DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- Candida DNA Snv Ql NAA+non-probe
- Display Name
- Candida sp DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Candida sp, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Candida spp. DNA ql. /PG |
| de-DE | German (Germany) | Candida sp DNA: Synonyms: Gelenksflüssigkeit |
| es-ES | Spanish (Spain) | Candida sp ADN: |
| es-MX | Spanish (Mexico) | ADN de Candida sp: |
| fr-CA | French (Canada) | Candida sp, ADN: |
| fr-FR | French (France) | Candida ADN: |
| it-IT | Italian (Italy) | Candida sp DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 假丝酵母属单个未知种 DNA: Synonyms: 依次型; |
97613-4 Citrobacter sp DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP186232-7 Citrobacter sp
Citrobacter is a genus of Gram-negative bacteria in the Enterobacteriaceae family and commonly found in soil, water and wastewater. They can also be found in the human intestine. They are rarely the source of illnesses, except for infections of the urinary tract, infant meningitis and sepsis. C. freundii strains have inducible ampC genes encoding resistance to ampicillin and first-generation cephalosporins. In addition, isolates of Citrobacter may be resistant to many other antibiotics as a result of resistance genes.
Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details.
Source: Wikipedia, Citrobacter
Fully-Specified Name
- Component
- Citrobacter sp DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- Citrobac sp DNA Snv Ql NAA+non-probe
- Display Name
- Citrobacter sp DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Citrobacter sp, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Citrobacter spp. DNA ql. /PG |
| de-DE | German (Germany) | Citrobacter sp DNA: Synonyms: Gelenksflüssigkeit |
| es-ES | Spanish (Spain) | Citrobacter sp ADN: |
| es-MX | Spanish (Mexico) | ADN de Citrobacter sp: |
| fr-FR | French (France) | Citrobacter ADN: |
| it-IT | Italian (Italy) | Citrobacter sp DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 柠檬酸杆菌属单个未知种 DNA: Synonyms: 依次型; |
97614-2 Clostridium perfringens [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP19598-9 Clostridium perfringens
Clostridium perfringens is an anaerobic, spore-forming bacteria that is a major cause of food poisoning in the United States. The disease results from the ingestion food contaminated with enterotoxin-producing C perfringens, usually C perfringens type A. Incubation time is 8-22 hours after ingestion of contaminated food, and symptoms include diarrhea, cramps, and abdominal pain. Fever, nausea, and vomiting are rare, and the disease lasts about 24 hours. C perfringens has also been sporadically reported in association with necrotizing enteritis. [NCBI Books: NBK8219]
Source: Regenstrief LOINC, NCBI Books: NBK8219
Fully-Specified Name
- Component
- Clostridium perfringens
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- C perfringens Snv Ql NAA+non-probe
- Display Name
- C. perfringens NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Clostridium perfringens, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Clostridium perfringens DNA ql. /PG |
| es-ES | Spanish (Spain) | Clostridium perfringens: |
| es-MX | Spanish (Mexico) | Clostridium perfringens: |
| fr-CA | French (Canada) | Clostridium perfringens: |
| fr-FR | French (France) | Clostridium perfringens: |
| it-IT | Italian (Italy) | Clostridium perfringens: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 产气荚膜梭菌: Synonyms: 产气荚膜梭状芽胞杆菌; |
97615-9 Cutibacterium avidum+granulosum DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP426558-5 Cutibacterium avidum+granulosum
Cutibacterium avidum and granulosum, formerly categorized in the genus Propionibacterium, are opportunistic pathogen associated with a variety of infections, including skin, infective endocarditis, device-related infections, and debrided wounds. PMID: 29848774 PMID: 32125556
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Cutibacterium avidum+granulosum DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- C avid+granul DNA Snv Ql NAA+non-probe
- Display Name
- C. avidum+granulosum DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Cutibacterium avidum and granulosum, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Cutibacterium avidum/granulosum DNA ql. /PG |
| es-ES | Spanish (Spain) | Cutibacterium avidum + granulosum ADN: |
| es-MX | Spanish (Mexico) | ADN de Cutibacterium avidum + granulosum: |
| fr-FR | French (France) | Cutibacterium avidum+granulosum ADN: |
| it-IT | Italian (Italy) | Cutibacterium avidum+granulosum DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 贪婪丙酸杆菌+颗粒丙酸杆菌 DNA: Synonyms: 依次型; |
97616-7 Enterobacter cloacae complex DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP220344-8 Enterobacter cloacae complex
The Enterobacter cloacae complex comprises of six phenotypically and genetically heterogeneous species: Enterobacter cloacae, Enterobacter asburiae, Enterobacter hormaechei, Enterobacter kobei, Enterobacter ludwigii and Enterobacter nimipressuralis. Among the Enterobacter spp., the E. cloacae complex species are the most common cause of nosocomial bloodstream infections, with E. cloacae and E. hormaechei most frequently isolated in human clinical specimens. The emergence and spread of antimicrobial resistance in the E. cloacae complex has increased the complexity of treating infections due to these organisms. Antibiotic resistance is mediated by production of extended-spectrum β-lactamases (ESBLs) and overproduction of AmpC β-lactamases. PMID: 22827309
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Enterobacter cloacae complex DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- E cloac comp DNA Snv Ql NAA+non-probe
- Display Name
- E. cloacae complex DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Enterobacter cloacae complex, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Enterobacter cloacae Komplex DNA ql. /PG |
| de-DE | German (Germany) | Enterobacter-cloacae-Komplex DNA: Synonyms: Gelenksflüssigkeit |
| es-ES | Spanish (Spain) | complejo Enterobacter cloacae ADN: |
| es-MX | Spanish (Mexico) | ADN del complejo de Enterobacter cloacae: |
| fr-FR | French (France) | Enterobacter complexe cloacae ADN: |
| it-IT | Italian (Italy) | Enterobacter cloacae, complesso DNA: Synonyms: Amplificazione target non basata su sonda Complesso enterobacter cloacae Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 阴沟肠杆菌复合菌群 DNA: Synonyms: 依次型; |
97617-5 Enterococcus faecalis DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP102526-3 Enterococcus faecalis
Enterococcus faecalis and faecium are Gram-positive commensal bacteria of the gastrointestinal tract. Although part of the normal intestinal flora, Enterococcus species are increasingly recognized as important pathogens and a common cause of nosocomial infections. E. faecalis and E. faecium account for the vast majority of infections in humans, which can include urinary tract infections, endocarditis, bacteremia, wounds infections, intraabdominal and pelvic infections. Enterococci can show both intrinsic and acquired resistance to antibiotics including penicillin, chloramphenicol, tetracyclines, rifampin, fluoroquinolones, aminoglycosides and vancomycin. E. faecium is responsible for the majority of vancomycin-resistant enterococcal (VRE) infections. The virulence of the Enterococci is generally considered lower than S. aureus. However, because these infections often occur in debilitated patients, the mortality can be as high as 50% [https://emedicine.medscape.com/article/216993-overview]
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Enterococcus faecalis DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- E faecalis DNA Snv Ql NAA+non-probe
- Display Name
- E. faecalis DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Enterococcus faecalis, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Enterococcus faecalis DNA ql. /PG |
| es-ES | Spanish (Spain) | Enterococcus faecalis ADN: |
| es-MX | Spanish (Mexico) | ADN de Enterococcus faecalis: |
| fr-FR | French (France) | Enterococcus faecalis ADN: |
| it-IT | Italian (Italy) | Enterococcus faecalis DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 粪肠球菌 DNA: Synonyms: 依次型; |
97618-3 Enterococcus faecium DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP102543-8 Enterococcus faecium
Enterococcus faecalis and faecium are Gram-positive commensal bacteria of the gastrointestinal tract. Although part of the normal intestinal flora, Enterococcus species are increasingly recognized as important pathogens and a common cause of nosocomial infections. E. faecalis and E. faecium account for the vast majority of infections in humans, which can include urinary tract infections, endocarditis, bacteremia, wounds infections, intraabdominal and pelvic infections. Enterococci can show both intrinsic and acquired resistance to antibiotics including penicillin, chloramphenicol, tetracyclines, rifampin, fluoroquinolones, aminoglycosides and vancomycin. E. faecium is responsible for the majority of vancomycin-resistant enterococcal (VRE) infections. The virulence of the Enterococci is generally considered lower than S. aureus. However, because these infections often occur in debilitated patients, the mortality can be as high as 50% [https://emedicine.medscape.com/article/216993-overview]
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Enterococcus faecium DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- E faecium DNA Snv Ql NAA+non-probe
- Display Name
- E. faecium DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Enterococcus faecium, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Enterococcus faecium DNA ql. /PG |
| es-ES | Spanish (Spain) | Enterococcus faecium ADN: |
| es-MX | Spanish (Mexico) | ADN de Enterococcus faecium: |
| fr-FR | French (France) | Enterococcus faecium ADN: |
| it-IT | Italian (Italy) | Enterococcus faecium DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 屎肠球菌 DNA: Synonyms: 依次型; |
97619-1 Escherichia coli DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP19605-2 Escherichia coli
Escherichia coli (EC) is a gram-negative, flagellated, rod-shaped bacterium. [https://vetmed.iastate.edu/vdpam/FSVD/swine/index-diseases/colibacillosis] The human gastrointestinal (GI) tract is colonized by EC within hours of birth. The natural barriers of the GI tract prevent infection by symbiotic EC except when they break down such as in peritonitis. EC occupy the mucous layer of the mammalian colon and is the most numerous anaerobe of the intestinal microflora. Some strains of EC have evolved virulence factors that precipitate serious disease including enteric diarrhea, urinary tract infections, sepsis and meningitis. The intestinal pathogens of EC include six pathotypes defined by the virulence factors they express. These include: enteropathogenic E. coli (EPEC), enterohaemorrhagic E. coli(EHEC), enterotoxigenic E. coli (ETEC), enteroaggregative E. coli (EAEC), enteroinvasive E. coli (EIEC) and diffusely adherent E. coli (DAEC). Uropathogenic EC (UPEC) is the most common EC infection that occurs outside the GI tract. The EC pathotypes that infects extraintestinal locations have been designated ExPEC. The EC pathotypes that infect animals and cause disease include EPEC, EHEC and ETEC.[nature.com/nrmicro/journal/v2/n2/full/nrmicro818.html][vetres.org/articles/vetres/pdf/2006/01/v6008.pdf]
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Escherichia coli DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- E coli DNA Snv Ql NAA+non-probe
- Display Name
- E. coli DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Escherichia coli, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Escherichia coli DNA ql. /PG |
| de-DE | German (Germany) | Escherichia coli DNA: Synonyms: Gelenksflüssigkeit |
| es-MX | Spanish (Mexico) | ADN de Escherichia coli: |
| es-ES | Spanish (Spain) | Escherichia coli ADN: |
| fr-CA | French (Canada) | Escherichia coli, ADN: |
| fr-FR | French (France) | Escherichia coli ADN: |
| it-IT | Italian (Italy) | Escherichia coli DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 大肠埃希菌 DNA: Synonyms: E coli; |
97620-9 Finegoldia magna DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP426552-8 Finegoldia magna
Finegoldia magna, previously classified as Peptostreptococcus magnus, is a Gram positive anaerobic bacteria. F magna has been identified as a pathogen in bone and joint infections, including septic arthritis, soft tissue abscesses and chronic wound infections, such as those related to diabetes, and prosthetic heart valve infectious endocarditis. F magna has several virulence factors including protein L, PAB, SufA, and FAF. PMID: 23030831
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Finegoldia magna DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- F magna DNA Snv Ql NAA+non-probe
- Display Name
- F. magna DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Finegoldia magna, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Finegoldia magna DNA ql. /PG |
| es-ES | Spanish (Spain) | Finegoldia magna ADN: |
| es-MX | Spanish (Mexico) | ADN de Finegoldia magna: |
| fr-FR | French (France) | Finegoldia magna ADN: |
| it-IT | Italian (Italy) | Finegoldia magna DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 大芬戈尔德菌 DNA: Synonyms: 依次型; |
97621-7 Haemophilus influenzae DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP16649-3 Haemophilus influenzae
Haemophilus influenza is a pleomorphic gram-negative coccobacillus. H influenzae is divided into six serotype (A-F) based on their capsular polysaccharides. The majority of haemophilus infections are caused by H influenza serotype B (HIB) which causes pneumonia, bacteremia, meningitis, epiglottitis, septic arthritis, cellulitis, otitis media, purulent pericarditis, endocarditis and osteomyelitis. Infections with the remaining serotypes lead to similar disease processes as HIB. Unencapsulated H influenzae that is not able to be typed (nontypable H influenzae) can cause ear infections in children and bronchitis in adults but also bacteremia and bacteremic pneumonia. Nontypable H influenza is the main cause of invasive H influenzae infections in all age groups. Transmission of H influenzae is by direct contact with respiratory aerosols. Neonates can become infected with H influenza by aspirating amniotic fluid or through contact with genital tract secretions.[https://www.cdc.gov/hi-disease/clinicians.html]
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Haemophilus influenzae DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- Haem influ DNA Snv Ql NAA+non-probe
- Display Name
- H. influenzae DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Haemophilus influenzae, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Member of these Groups Get Info
| LOINC Group | Group Name |
|---|---|
| LG41617-8 | Haemophilus influenzae |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Haemophilus influenzae DNA ql. /PG |
| es-ES | Spanish (Spain) | Haemophilus influenzae ADN: |
| es-MX | Spanish (Mexico) | ADN de Haemophilus influenzae: |
| fr-CA | French (Canada) | Haemophilus influenzae, ADN: |
| fr-FR | French (France) | Haemophilus influenzae ADN: |
| it-IT | Italian (Italy) | Haemophilus influenzae DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 流感嗜血杆菌 DNA: Synonyms: 依次型; |
97622-5 Kingella kingae DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP121193-9 Kingella kingae DNA
Kingella kingae is a common etiologic agent of occult bacteremia and joint and bone infections in young children between the ages of 6 and 36 months as well as opportunistic infections in older children and adults that are immunocompromised. Cases of K. kingae are more commonly diagnosed in developed countries, possibly due to the wider availability of molecular assays for organism detection compared to developing nations. K. kingae is a Gram-negative coccobacillus with tapered ends that is usually arranged in pairs or short chains. A variant of the organism grows as pinpoint colonies and is called a small-colony variant (SCV). K. kingae's virulence mechanisms include pili, polysaccharide capsules, and a toxin named RTX. The genes encoding the RTX toxin (rtxA and rtxB) are two of the molecular targets that are used to detect K. kingae. Other targets include the 16S rRNA and cpn60 genes, both of which are less sensitive than the rtx genes. PMID: 25567222
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Kingella kingae DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- K kingae DNA Snv Ql NAA+non-probe
- Display Name
- K. kingae DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Kingella kingae, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Kingella kingae DNA ql. /PG |
| es-ES | Spanish (Spain) | Kingella kingae ADN: |
| es-MX | Spanish (Mexico) | ADN de Kingella kingae: |
| fr-FR | French (France) | Kingella kingae ADN: |
| it-IT | Italian (Italy) | Kingella kingae DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 金氏金菌 DNA: Synonyms: 依次型; |
97623-3 Klebsiella aerogenes DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP309965-4 Klebsiella aerogenes
Klebsiella aerogenes, formerly known as Enterobacter aerogenes, is a Gram-negative bacterium in the family Enterobacteriaceae. It is found in the gastrointestinal tracts of mammals and subsequently in water, air and soil. K. aerogenes has developed multidrug-resistance (MDR), and is sometimes included in the ESKAPE (Enterococcus faecium, Staphylococcus aureus, Klebsiella pneumoniae, Acinetobacter baumannii, Pseudomonas aeruginosa, and Enterobacter sp.) human pathogen group. This group of pathogens is a common cause of clinically important infections worldwide. PMID: 28794987
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Klebsiella aerogenes DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- K. aerogenes DNA Snv Ql NAA+non-probe
- Display Name
- K. aerogenes DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Klebsiella aerogenes, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Klebsiella aerogenes DNA ql. /PG |
| de-DE | German (Germany) | Klebsiella aerogenes DNA: Synonyms: Gelenksflüssigkeit |
| es-ES | Spanish (Spain) | Klebsiella aerogenes ADN: |
| es-MX | Spanish (Mexico) | ADN de Klebsiella aerogenes: |
| fr-FR | French (France) | Klebsiella aerogenes ADN: |
| it-IT | Italian (Italy) | Klebsiella aerogenes DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 产气克雷伯菌 DNA: Synonyms: 依次型; |
97624-1 Klebsiella pneumoniae+Klebsiella variicola+Klebsiella quasipneumoniae DNA [Presence] in Synovial fluid by NAA with non-probe detection
Fully-Specified Name
- Component
- Klebsiella pneumoniae+Klebsiella variicola+Klebsiella quasipneumoniae DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- K. pneumon group DNA Snv Ql NAA+non-prb
- Display Name
- K. pneumoniae+variicola+quasipneumoniae DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Klebsiella pneumoniae+Klebsiella variicola+Klebsiella quasipneumoniae, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Klebsiella pn./va./qupn. DNA ql. /PG |
| de-DE | German (Germany) | Klebsiella pneumoniae+Klebsiella variicola+Klebsiella quasipneumoniae DNA: Synonyms: Gelenksflüssigkeit |
| es-ES | Spanish (Spain) | Klebsiella pneumoniae + Klebsiella variicola + Klebsiella quasipneumoniae ADN: |
| es-MX | Spanish (Mexico) | Klebsiella pneumoniae + Klebsiella variicola + ADN de Klebsiella quasipneumoniae: |
| fr-FR | French (France) | Klebsiella pneumoniae+Klebsiella variicola+Klebsiella quasipneumoniae ADN: |
| it-IT | Italian (Italy) | Klebsiella pneumoniae+Klebsiella variicola+Klebsiella quasipneumoniae DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 肺炎克雷伯菌+变栖克雷伯菌+类肺炎克雷伯菌 DNA: Synonyms: 依次型; |
97625-8 Morganella morganii DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP411486-6 Morganella morganii
Morganella morganii is a rod-shaped, anaerobic, Gram-negative bacteria in the Enterobacteriacaeae family commonly found in the environment and human gastrointestinal tract. Despite its wide distribution, the species is considered a rare cause of nosocomial infections and is most commonly associated with post-operative wound and urinary tract infections. Certain clinical isolates are resistance to multiple antibiotics by carrying various resistance markers (e.g.blaNDM-1 and qnrD1). Other M. morgannii isolates have been found to carry other resistance markers, such as CTX-M, IMP, KPC, OXA, and VIM. PMID: 27421818
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Morganella morganii DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- M. morganii DNA Snv Ql NAA+non-probe
- Display Name
- Morganella morganii DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Morganella morganii, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Morganella morganii DNA ql. /PG |
| de-DE | German (Germany) | Morganella morganii DNA: Synonyms: Gelenksflüssigkeit |
| es-ES | Spanish (Spain) | Morganella morganii ADN: |
| es-MX | Spanish (Mexico) | ADN de Morganella morganii: |
| fr-FR | French (France) | Morganella morganii ADN: |
| it-IT | Italian (Italy) | Morganella morganii DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 摩根摩根菌 DNA: Synonyms: 依次型; |
97626-6 Neisseria gonorrhoeae DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP14316-1 Neisseria gonorrhoeae
Neisseria gonorrhoeae are gram-negative cocci usually seen in pairs with the adjacent sides flattened. Pili, filament-like appendages, extend from the cell surface and have a role in adherence. Gonorrhea is usually acquired by sexual contact. Men and women aged 15-29 have the highest incidence of gonorrhea. Number of sexual partners, sexual practices and preference, condom use and population mobility contribute to disease incidence. The most frequent sites are the cervix, urethra, rectum, pharynx and conjunctiva. The most common symptom in men is discharge that may be scanty and clear or cloudy to copious and purulent, and often dysuria. Asymptomatic men are an important reservoir for transmission. Endocervical infection is the most common form of infection in women. Ocular infections occur most commonly in newborns who are exposed in the birth canal and can lead to corneal scarring or perforation. Gonococcal bacteremia may lead to disseminated infection including pelvic inflammatory disease in as many as 15 percent of women, leading to an increased probability of infertility and ectopic pregnancy. While antibiotics have successfully treated gonorrhea for decades, N. gonorrhoeae has developed antimicrobial resistance to every drug used for treatment. The Centers for Disease Control and Prevention recommends combination therapy using two antimicrobials with different mechanisms of action (e.g., a cephalosporin plus azithromycin) to improve treatment efficacy and potentially slow the spread of resistance to cephalosporins. [NCBI Books:NBK7650] [CDC:std/tg2015/gonorrhea]
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Neisseria gonorrhoeae DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- N gonorrhoea DNA Snv Ql NAA+non-probe
- Display Name
- N. gonorrhoeae DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Neisseria gonorrhoeae, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Neisseria gonorrhoeae DNA ql. /PG |
| de-DE | German (Germany) | Neisseria gonorrhoeae DNA: Synonyms: Gelenksflüssigkeit |
| es-ES | Spanish (Spain) | Neisseria gonorrhoeae ADN: |
| es-MX | Spanish (Mexico) | ADN de Neisseria gonorrhoeae: |
| fr-CA | French (Canada) | Neisseria gonorrhoeae, ADN: |
| fr-FR | French (France) | Neisseria gonorrhoeae ADN: |
| it-IT | Italian (Italy) | Neisseria gonorrhoeae DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 淋病奈瑟菌 DNA: Synonyms: 依次型; |
97627-4 Parvimonas micra DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP426553-6 Parvimonas micra
Parvimonas micra, previously classified as Peptostreptococcus micros, is a Gram positive anaerobic bacteria. P micra is part of the normal gastrointestinal and gingival crevice flora, and has been identified as a pathogen in various types of infections including periodontal disease and infected root canals, chronic wound infections, acute burn and surgical wound infections, and joint infections. PMID: 23030831
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Parvimonas micra DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- P micra DNA Snv Ql NAA+non-probe
- Display Name
- P. micra DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Parvimonas micra, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Parvimonas micra DNA ql. /PG |
| es-ES | Spanish (Spain) | Parvimonas micra ADN: |
| es-MX | Spanish (Mexico) | ADN de Parvimonas micra: |
| fr-FR | French (France) | Parvimonas micra ADN: |
| it-IT | Italian (Italy) | Parvimonas micra DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 微小微单胞菌 DNA: Synonyms: 依次型; |
97628-2 Peptoniphilus sp DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP426555-1 Peptoniphilus sp
Peptoniphilus species, previously classified as Peptostreptococcus, are Gram positive anaerobic bacteria. Peptoniphilus species have been identified as pathogens in various types of infections including chronic wounds such as those related to diabetes, pressure ulcers, bone and joint infections, sinus infections, and genitourinary infections. PMID: 23030831
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Peptoniphilus sp DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- Peptoniphilus sp DNA Snv Ql NAA+non-prb
- Display Name
- Peptoniphilus sp DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Peptoniphilus sp, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Peptoniphilus spp. DNA ql. /PG |
| es-ES | Spanish (Spain) | Peptoniphilus sp ADN: |
| es-MX | Spanish (Mexico) | ADN de Peptoniphilus sp: |
| fr-FR | French (France) | Peptoniphilus ADN: |
| it-IT | Italian (Italy) | Peptoniphilus sp DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 嗜胨菌属单个未知种 DNA: Synonyms: 依次型; |
97629-0 Peptostreptococcus anaerobius DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP426557-7 Peptostreptococcus anaerobius
Peptostreptococcus anaerobius is a Gram positive anaerobic species and is commonly found in abdominal and female genitourinary infections. It has also been identified as a pathogen in skin and soft tissue infections, joint infections, abscesses in a variety of locations, endocarditis, and burn and surgical wounds. PMID: 23030831
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Peptostreptococcus anaerobius DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- P anaerobius DNA Snv Ql NAA+non-probe
- Display Name
- P. anaerobius DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Peptostreptococcus anaerobius, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Peptostreptococcus anaerobius DNA ql. /PG |
| es-ES | Spanish (Spain) | Peptostreptococcus anaerobius ADN: |
| es-MX | Spanish (Mexico) | ADN de Peptostreptococcus anaerobius: |
| fr-FR | French (France) | Peptostreptococcus anaerobius ADN: |
| it-IT | Italian (Italy) | Peptostreptococcus anaerobius DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 厌氧消化链球菌 DNA: Synonyms: 依次型; |
97630-8 Proteus sp DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP105048-5 Proteus sp
Proteus sp. is a genus of rod shaped bacteria characterized by their intensive swarming growth. They are opportunistic pathogens and can be found in urine, feces, wounds, and other clinical sources. Hosts for Proteus sp. include: flies, fish, wild and domestic animals. Proteus sp. presence in soil, is a sign of fecal pollution and poses a risk of water and seafood contamination. Serological and molecular testing are used to determine the specific Proteus sp. strain. Proteus sp. strains can cause a range of illnesses from diarrhea, kidney stones and respiratory tract infections to meningitis. PMID: 26748500
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Proteus sp DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- Proteus sp DNA Snv Ql NAA+non-probe
- Display Name
- Proteus sp DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Proteus sp, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Proteus spp. DNA ql. /PG |
| de-DE | German (Germany) | Proteus sp DNA: Synonyms: Gelenksflüssigkeit |
| es-ES | Spanish (Spain) | Proteus sp ADN: |
| es-MX | Spanish (Mexico) | ADN de Proteus sp: |
| fr-FR | French (France) | Proteus ADN: |
| it-IT | Italian (Italy) | Proteus sp DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 变形杆菌属单个未知种 DNA: Synonyms: 依次型; |
97631-6 Pseudomonas aeruginosa DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP19204-4 Pseudomonas aeruginosa
A species of gram-negative, aerobic, rod-shaped bacteria commonly isolated from clinical specimens (wound, burn, and urinary tract infections). It is also found widely distributed in soil and water. P. aeruginosa is a major agent of nosocomial infection.
Source: National Library of Medicine, MeSH 2006
Fully-Specified Name
- Component
- Pseudomonas aeruginosa DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- P aeruginosa DNA Snv Ql NAA+non-probe
- Display Name
- P. aeruginosa DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Pseudomonas aeruginosa, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Pseudomonas aeruginosa DNA ql. /PG |
| es-ES | Spanish (Spain) | Pseudomonas aeruginosa ADN: |
| es-MX | Spanish (Mexico) | ADN de Pseudomonas aeruginosa: |
| fr-CA | French (Canada) | Pseudomonas aeruginosa, ADN: |
| fr-FR | French (France) | Pseudomonas aeruginosa ADN: |
| it-IT | Italian (Italy) | Pseudomonas aeruginosa DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 铜绿假单胞菌 DNA: Synonyms: 依次型; |
97632-4 Salmonella sp DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP16750-9 Salmonella sp
Salmonella are gram-negative, flagellated, facultative intracellular, anaerobic bacilli with O, H and Vi surface antigens. Once ingested, Salmonella survives the gastric acid barrier and penetrates the epithelial cells of the small and large intestines. The invasion of the epithelial cells stimulates the release of cytokines and a subsequent inflammatory response leading to diarrhea and possible ulceration of the mucosa.[NCBI Books: 8435] Antibodies to Salmonella are the body's defense when the bacteria is outside of its host cell which occurs at the initial infection and when the bacillus moves from cell to cell. There is a 10 minute window of opportunity when the Salmonella bacillus leaves the macrophage to invade another. During that time, antibodies and complement work to eradicate the bacilli, but some of the extracellular bacilli will evade attack and enter another host cell. Studies have shown that vaccines play an important role in the fight against typhoid fever. PMID: 25566248 There are two species of Salmonella: S. enterica and S. bongori. These species can be further subclassified into subspecies and serovars.
Veterinary Medicine:
Salmonella infection is most often caused by the serovars Salmonella choleraesuis, and Salmonella typhimurium and less often by Salmonella derby. Infected pigs can be asymptomatic and become carriers of S. choleraesius. Typically, the bacteria survive in the mesenteric lymph nodes that drain into the intestines, and are not shed in the feces unless the pig is under stress. The carrier state lasts for weeks to months and is self-limiting. Severe infection with S. choleraesius can be serious starting out as septicemia and progressing to pneumonia and enteritis. The infection can spread to various tissues including to the central nervous system leading to meningitis and to the joints where it manifests as arthritis. Severe infections with S. choleraesius occurs at any age, but most often in pigs 12-14 weeks of age.[http://www.thepigsite.com/pighealth/article/357/salmonellosis/]
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Salmonella sp DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- Salmonella DNA Snv Ql NAA+non-probe
- Display Name
- Salmonella sp DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Salmonella sp, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Salmonellen spp. DNA ql. /PG |
| de-DE | German (Germany) | Salmonella sp DNA: Synonyms: Gelenksflüssigkeit |
| es-ES | Spanish (Spain) | Salmonella sp ADN: |
| es-MX | Spanish (Mexico) | ADN de Salmonella sp: |
| fr-CA | French (Canada) | Salmonella sp, ADN: |
| fr-FR | French (France) | Salmonella ADN: |
| it-IT | Italian (Italy) | Salmonella sp DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 沙门菌属单个未知种 DNA: Synonyms: 依次型; |
97633-2 Serratia marcescens DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP102546-1 Serratia marcescens
Serratia marcescens is an opportunistic, gram negative, pathogen from the family Enterobacteriaceae that causes both opportunistic and nosocomial infections. It is estimated that only 1-2% of hospital acquired infections, typically of the respiratory tract, urinary tract, surgical wounds or soft tissues, are due to Serratia marcescens. Serratia-associated meningitis can occur in pediatric patients. Diagnosis of Serratia marcescens infection is made through standard laboratory testing of blood, urine, pus and other bodily fluids. Severe infections, including meningitis and sepsis, have a high mortality rate. PMID: 23543704
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Serratia marcescens DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- S marcescens DNA Snv Ql NAA+non-probe
- Display Name
- S. marcescens DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Serratia marcescens, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Serratia marcescens DNA ql. /PG |
| de-DE | German (Germany) | Serratia marcescens DNA: Synonyms: Gelenksflüssigkeit |
| es-ES | Spanish (Spain) | Serratia marcescens ADN: |
| es-MX | Spanish (Mexico) | ADN de Serratia marcescens: |
| fr-FR | French (France) | Serratia marcescens ADN: |
| it-IT | Italian (Italy) | Serratia marcescens DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 粘质沙雷氏菌 DNA: Synonyms: 依次型; |
97634-0 Staphylococcus aureus DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP16662-6 Staphylococcus aureus
Potentially pathogenic bacteria found in nasal membranes, skin, hair follicles, and perineum of warm-blooded animals. They may cause a wide range of infections and intoxications.
Source: National Library of Medicine, MeSH 2006
LP16662-6 Staphylococcus aureus
Staphylococcus aureus (S. aureus) are cocci-shaped gram-positive bacteria that assemble in grape-like clusters and cause a wide variety of infections. Up to 50% of adults carry S. aureus on their skin or in their mucous membranes. It is highly adaptable, resulting in drug resistant strains: methicillin-resistant S. aureus (MRSA), methicillin-susceptbile S. aureus (MSSA), vancomycin-intermediate S. aureus (VISA) and vancomycin-resistant S. aureus (VRSA). Examples of human infections caused by S. aureus: bacteremia, gastroenteritis, infective endocarditis, meningitis, osteomyelitis, pulmonary infections, septic arthritis, skin and soft tissue infections, toxic shock syndrome, and urinary tract infections. Diagnosis of S. aureus infection may vary by infection site, e.g., clinical signs and symptoms for skin infections, blood or tissue cultures for other infection types. People with chronic health conditions, weakened immune systems or IV drug users are at a greater risk, as are patients in intensive care units (ICUs) and those with a history of certain types of surgeries and patients with implanted medical devices. PMID: 28722898
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Staphylococcus aureus DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- S aureus DNA Snv Ql NAA+non-probe
- Display Name
- S. aureus DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Staphylococcus aureus, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Staphylococcus aureus DNA ql. /PG |
| es-ES | Spanish (Spain) | Staphylococcus aureus ADN: |
| es-MX | Spanish (Mexico) | ADN de Staphylococcus aureus: |
| fr-CA | French (Canada) | Staphylococcus aureus, ADN: |
| fr-FR | French (France) | Staphylococcus aureus ADN: |
| it-IT | Italian (Italy) | Staphylococcus aureus DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 金黄色葡萄球菌 DNA: Synonyms: 依次型; |
97635-7 Staphylococcus lugdunensis DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP183769-1 Staphylococcus lugdunensis
Staphylococcus lugdunensis is a coagulase-negative, Gram-positive bacterium and a component of normal human skin flora. However, since the 1990s, this organism has been increasingly implicated in a wide range of severe infections, including osteoarticular infections, bacteremia, foreign body infections, and endocarditis. This information, taken together with its proven ability to produce a number of virulence factors, places S. lugdunensis in the category of emerging pathogen. Unlike many fellow coagulase-negative staphylococci, it is susceptible to a wide range of antimicrobials PMID: 28835477.
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Staphylococcus lugdunensis DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- S lugdunensis DNA Snv Ql NAA+non-probe
- Display Name
- Staphylococcus lugdunensis DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Staphylococcus lugdunensis, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Staphylococcus lugdunensis DNA ql. /PG |
| es-ES | Spanish (Spain) | Staphylococcus lugdunensis ADN: |
| es-MX | Spanish (Mexico) | ADN de Staphylococcus lugdunensis: |
| fr-FR | French (France) | Staphylococcus lugdunensis ADN: |
| it-IT | Italian (Italy) | Staphylococcus lugdunensis DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 里昂葡萄球菌 DNA: Synonyms: 依次型; |
97636-5 Streptococcus agalactiae DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP14405-2 Streptococcus agalactiae
Streptococcus agalactiae (S. agalactiae) or Group B Streptococcus (GBS) is a gram-positive coccus that causes serious diseases, primarily in neonates, pregnant patients, elderly patients and those with significant underlying diseases. S. agalactiae typically presents as skin and soft tissue infections; while meningitis and endocarditis are rare presentations, they are marked with serious morbidity and mortality. Blood cultures confirm S. agalactiae presence. Chronic kidney disease, cardiac failure, history of neoplasia, history of ischemic heart disease, and diabetes mellitus are risks for acquiring agressive S. agalactiae infection.
Source: Regenstrief LOINC, [PMID: 30034954]
Fully-Specified Name
- Component
- Streptococcus agalactiae DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- Gp B Strep DNA Snv Ql NAA+non-probe
- Display Name
- S. agalactiae DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Streptococcus agalactiae, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: GpB.S. AG ql. /L |
| de-DE | German (Germany) | Streptococcus agalactiae DNA: Synonyms: Gelenksflüssigkeit |
| es-ES | Spanish (Spain) | Streptococcus agalactiae ADN: |
| es-MX | Spanish (Mexico) | ADN de Streptococcus agalactiae: |
| fr-CA | French (Canada) | Streptococcus agalactiae, ADN: |
| fr-FR | French (France) | Streptococcus agalactiae ADN: |
| it-IT | Italian (Italy) | Streptococcus agalactiae DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 无乳链球菌 DNA: Synonyms: B 族链球菌 DNA B 族链球菌; |
97637-3 Streptococcus pneumoniae DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP14410-2 Streptococcus pneumoniae
Streptococcus pneumoniae are gram-positive cocci that are nonmotile and nonsporulating and usually require complex culture media. Older streptococcal cultures, beyond the most active growth period (the logarithmic phase), sometimes lose their gram-positive staining characteristics. S. pneumoniae are part of the normal respiratory tract flora. Disease usually results due to the acquisition of a new strain following a change in the normal flora, often due to a preceding virus. S. pneumonaie causes otitis media, sinusitis and pneumonia in the middle ear, sinuses or lungs, respectively. Meningitis can occur by bloodstream invasion from the lungs or by extension of otitis media or sinusitis to the meninges. Bacteremia can result in osteomyelitis (infection of bones) or arthritis (of joints). Most bacterial pneumonia occurring after the neonatal period is caused by S. pneumoniae. Pneumococcal pneumonia is seen most commonly in elderly or immunosuppressed individuals. In the United States, it is most prevalent in winter. Diagnosis is usually based on a sputum Gram stain and culture although blood or cerebrospinal fluid may be cultured. While penicillin has been the standard treatment, some strains have proven resistant to penicillin and multiple antibiotics. A vaccine exists. [NCBI Books:NBK7611]
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Streptococcus pneumoniae DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- S pneum DNA Snv Ql NAA+non-probe
- Display Name
- S. pneumoniae DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Streptococcus pneumoniae, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Streptoc. pn. AK IgG |
| de-DE | German (Germany) | Streptococcus pneumoniae DNA: Synonyms: Gelenksflüssigkeit |
| es-ES | Spanish (Spain) | Streptococcus pneumoniae ADN: |
| es-MX | Spanish (Mexico) | ADN de Streptococcus pneumoniae: |
| fr-CA | French (Canada) | Streptococcus pneumoniae, ADN: |
| fr-FR | French (France) | Streptococcus pneumoniae ADN: |
| it-IT | Italian (Italy) | Streptococcus pneumoniae DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 肺炎链球菌 DNA: Synonyms: 依次型; |
97638-1 Streptococcus pyogenes DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP15188-3 Streptococcus pyogenes
Streptococcus pyogenes, also known as Group A Streptococcus (GAS), is a species of gram-positive, coccoid, beta-hemolytic bacteria. It is responsible for a wide variety of both invasive and non-invasive diseases including scarlet fever, pharyngitis, impetigo, cellulitis, necrotizing fasciitis and toxic shock syndrome, as well as the sequelae of rheumatic fever and acute poststreptococcal glomerulonephritis. Invasive GAS infections can be associated with very high mortality rates. PMID: 26866208
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Streptococcus pyogenes DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- S pyo DNA Snv Ql NAA+non-probe
- Display Name
- S. pyogenes DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Streptococcus pyogenes, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Member of these Groups Get Info
| LOINC Group | Group Name |
|---|---|
| LG41610-3 | Streptococcus pyogenes |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Strept.pyog. Klt./SM |
| de-DE | German (Germany) | Streptococcus pyogenes DNA: Synonyms: Gelenksflüssigkeit |
| es-ES | Spanish (Spain) | Streptococcus pyogenes ADN: |
| es-MX | Spanish (Mexico) | ADN de Streptococcus pyogenes: |
| fr-CA | French (Canada) | Streptococcus pyogenes, ADN: |
| fr-FR | French (France) | Streptococcus pyogenes ADN: |
| it-IT | Italian (Italy) | Streptococcus pyogenes DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 化脓性链球菌 DNA: Synonyms: A 族链球菌 DNA A 族链球菌; |
97639-9 Streptococcus sp DNA [Presence] in Synovial fluid by NAA with non-probe detection
Part Descriptions
LP17202-0 Streptococcus sp
Streptococcus are a genus of spherical or ovoid bacteria whose organisms occur in pairs or chains. They are catalase negative,non-spore-forming, facultative anaerobes. Many species are commensals or parasites on man or animals, whereas some species, like Streptococcus pneumoniae and Streptococcus pyogenes are well characterized pathogens. A few species are saprophytes and occur in the natural environment.
Source: National Library of Medicine, MeSH 2006
LP17202-0 Streptococcus sp
Streptococcus is a genus of spherical Gram-positive bacteria belonging to the lactic acid bacteria group. Most streptococci are oxidase- and catalase-negative, and many are facultative anaerobes. In the medical setting, the most important groups are the alpha-hemolytic streptococci S. pneumoniae and Streptococcus Viridans-group, and the beta-hemolytic streptococci of Lancefield groups A and B (also known as "Group A strep" and "Group B strep"). Other beta-hemolytic groups include C, D (enterococci), F, G, and H.
Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details.
Source: Wikipedia, Streptococcus
Fully-Specified Name
- Component
- Streptococcus sp DNA
- Property
- PrThr
- Time
- Pt
- System
- Synv fld
- Scale
- Ord
- Method
- Non-probe.amp.tar
Additional Names
- Short Name
- Streptococcus DNA Snv Ql NAA+non-probe
- Display Name
- Streptococcus sp DNA NAA+non-probe Ql (Syn fld)
- Consumer Name Alpha Get Info
- Streptococcus sp, Synovial fluid
Basic Attributes
- Class
- MICRO
- Type
- Laboratory
- First Released
- Version 2.70
- Last Updated
- Version 2.70
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Streptococc.sp Kt/SM |
| es-ES | Spanish (Spain) | Streptococcus sp ADN: |
| es-MX | Spanish (Mexico) | ADN de Streptococcus sp: |
| fr-CA | French (Canada) | Streptococcus sp, ADN: |
| fr-FR | French (France) | Streptococcus ADN: |
| it-IT | Italian (Italy) | Streptococcus sp DNA: Synonyms: Amplificazione target non basata su sonda Microbiologia Presenza o Soglia Punto nel tempo (episodio) Sonda con amplificazione Sonda con amplificazione del target Sonda di DNA |
| zh-CN | Chinese (China) | 链球菌属单个未知种 DNA: Synonyms: 依次型; |
62261-3 Vancomycin resistance vanA + vanB genes [Presence] by Molecular method
Part Descriptions
LP105141-8 Bacterial vancomycin resistance vanA+vanB genes
This test is used for the detection of vancomycin resistance genes by multiplex PCR. Vancomycin is a glycopeptide antibiotic used to treat various infections, primarily those caused by gram-positive bacteria. Vancomycin resistance genes were first found in enterococci, and more recently have been found in Staphylococcus aureus. The emergence of vancomycin-resistant enterococci (VRE) and vancomycin-resistant Staphylococcus aureus (VRSA) in hospitalized patients has lead to a restricted use of vancomycin. To date, multiple vancomycin resistance genes have been characterized, including: vanA, vanB, vanC (vanC-1, vanC-2, vanC-3), and VanD. Of the six van types, vanA and vanB are the most resistant to vancomycin, and are the two types that cause VRSA. PMID: 24983424
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Bacterial vancomycin resistance vanA+vanB genes
- Property
- PrThr
- Time
- Pt
- System
- Isolate/Specimen
- Scale
- Ord
- Method
- Molgen
Additional Names
- Short Name
- vanA+vanB Islt/Spm Ql
- Display Name
- Vancomycin resistance vanA + vanB genes Molgen Ql (Islt/Spec)
- Consumer Name Alpha Get Info
- Vancomycin resistance vanA + vanB genes
Basic Attributes
- Class
- ABXBACT
- Type
- Laboratory
- First Released
- Version 2.34
- Last Updated
- Version 2.73
- Change Reason
- The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.; Removed parentheses from Component because the contents represent gene names, not acronyms.; Updated System from "Isolate" and Method from "Probe.amp.tar" according to the new, more sustainable model for LOINC molecular resistance terms [Approved by LOINC Laboratory Committee in June 2018].
- Order vs. Observation
- Observation
- Common Test Rank Get Info
- 5713
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 104991-5 | Bacterial resistance panel |
| 85762-3 | Blood pathogens panel by NAA with non-probe detection in Positive blood culture |
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Vancomycin Resistenz Gene (vanA,vanB) ql. |
| de-DE | German (Germany) | Bakterielle Vancomycin-Resistenz vanA + vanB-Gene: |
| es-ES | Spanish (Spain) | Gen de resistencia a vancomicina: |
| es-MX | Spanish (Mexico) | Resistencia bacteriana a la vancomicina vanA + genes vanB: |
| fr-FR | French (France) | Résistance bactérienne à la vancomycine vanA+vanB gènes: |
| it-IT | Italian (Italy) | Resistenza batterica a vancomicina (vanA+vanB), geni: Synonyms: Genetica molecolare Geni di resistenza batterica a vancomicina (vanA + Isolato o Campione Presenza o Soglia Punto nel tempo (episodio) Suscettibilità agli antibiotici |
| nl-NL | Dutch (Netherlands) | bacteriële vancomycineresistentie (vanA + vanB) gen: Synonyms: isolaat/specimen molgen |
| pt-BR | Portuguese (Brazil) | Genes bacterianos resistentes a vancomicina (vanA + vanB): |
| zh-CN | Chinese (China) | 细菌万古霉素耐药 vanA+vanB 基因: Synonyms: 供检查用的材料; |
96309-0 Methicillin resistance mecA+mecC genes+SCCmec+OrfX junction [Presence] by Molecular method
Term Description
This assay detects the presence of nucleic acids within the mecA/mecC genes and SCCmec+OrfX junction (MREJ) found in methicillin-resistance bacteria. This assay detects but does not differentiate between mecA/C and MREJ.
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Bacterial methicillin resistance mecA+mecC genes+SCCmec+OrfX junction
- Property
- PrThr
- Time
- Pt
- System
- Isolate/Specimen
- Scale
- Ord
- Method
- Molgen
Additional Names
- Short Name
- mecA+mecC+MREJ Islt/Spm Ql
- Display Name
- Methicillin resistance mecA+mecC genes+SCCmec+OrfX junction Molgen Ql (Islt/Spec)
- Consumer Name Alpha Get Info
- Methicillin resistance mecA+mecC genes+SCCmec+OrfX junction
Basic Attributes
- Class
- ABXBACT
- Type
- Laboratory
- First Released
- Version 2.69
- Last Updated
- Version 2.69
- Order vs. Observation
- Observation
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 85762-3 | Blood pathogens panel by NAA with non-probe detection in Positive blood culture |
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
| 92958-8 | Respiratory pathogens DNA and RNA panel - Lower respiratory specimen by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-DE | German (Germany) | Bakterielle Methicillin-Resistenz mecA+mecC-Gene+SCCmec+OrfX junction: |
| de-AT | German (Austria) | Synonyms: Methicillin Resistenz Gen (MecA/MecC) ql. |
| es-ES | Spanish (Spain) | Genes mecA + mecC + SCCmec + OrfX de resistencia bacteriana a la meticilina: |
| es-MX | Spanish (Mexico) | Resistencia a la meticilina bacteriana mecA + genes mecC + unión SCCmec + OrfX: |
| fr-FR | French (France) | Résistance bactérienne à la méticilline mecA+mecC gènes+SCCmec+jonction OrfX: |
| it-IT | Italian (Italy) | Resistenza batterica alla meticillina, geni mecA+mecC+SCCmec+ giunzione OrfX: Synonyms: Genetica molecolare Geni mecA+mecC di resistenza batterica alla metici Isolato o Campione Presenza o Soglia Punto nel tempo (episodio) Suscettibilità agli antibiotici |
| nl-NL | Dutch (Netherlands) | bacteriële meticillineresistentie mecA-gen + mecC-gen + SCCmec-Orfx-verbinding: Synonyms: isolaat/specimen molgen |
| zh-CN | Chinese (China) | 细菌甲氧西林耐药 mecA+mecC 基因+SCCmec-OrfX 结合部: Synonyms: 2,6-二甲氧基苯青霉素; |
49617-4 Carbapenem resistance blaKPC gene [Presence] by Molecular method
Part Descriptions
LP64707-0 Bacterial carbapenem resistance blaKPC gene
Non-susceptibility to carbapenems in gram-negative bacilli by means of the enzyme KPC (Klebsiella pneumoniae carbapenemase) is becoming more common. The gene beta-lactamase KPC (bla(KPC)) encodes KPC enzyme production, which in turn hydrolyzes and inactivates carbapenem antibiotics. KPC enzymes are a class A beta lactamases with several variants (KPC-2, KPC-3, etc) known. Various methods are used to detect specific portions of genes encoding KPC production. Carbapenemases can also be detected by other methods, including the modified Hodge test to detect carbapenemase production in isolates and minimum inhibitory concentration (MIC) to determine level of resistance.
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Bacterial carbapenem resistance blaKPC gene
- Property
- PrThr
- Time
- Pt
- System
- Isolate/Specimen
- Scale
- Ord
- Method
- Molgen
Additional Names
- Short Name
- blaKPC Islt/Spm Ql
- Display Name
- Carbapenem resistance blaKPC gene Molgen Ql (Islt/Spec)
- Consumer Name Alpha Get Info
- Carbapenem resistance blaKPC gene
Basic Attributes
- Class
- ABXBACT
- Type
- Laboratory
- First Released
- Version 2.22
- Last Updated
- Version 2.73
- Change Reason
- The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.; Corrected Component from "Bacterial carbapenemase resistance" to "Bacterial carbapenem resistance" (because the bacteria are resistant to carbapenem antibiotics by virtue of producing carbapenemase) and removed parentheses around and within the gene name according to recommended nomenclature [PMID: 25249841]; Updated System from "Isolate" and Method from "Probe.amp.tar" according to the new, more sustainable model for LOINC molecular resistance terms [Approved by LOINC Laboratory Committee in June 2018].
- Order vs. Observation
- Both
- Common Test Rank Get Info
- 1861
Example Answer List LL360-9
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Positive Copyright http://snomed.info/sct ID:10828004 Positive (qualifier value) | LA6576-8 | ||
| Negative Copyright http://snomed.info/sct ID:260385009 Negative (qualifier value) | LA6577-6 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 104991-5 | Bacterial resistance panel |
| 85762-3 | Blood pathogens panel by NAA with non-probe detection in Positive blood culture |
| 97324-8 | Carbapenem resistant bacteria identification and resistance panel by Molecular genetics method |
| 85502-3 | Carbapenemase resistance genes panel by Molecular genetics method |
| 93698-9 | Gram negative bacterial resistance panel by Molecular genetics method |
| 93407-5 | Gram negative blood culture panel by NAA with probe detection in Positive blood culture |
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
| 92958-8 | Respiratory pathogens DNA and RNA panel - Lower respiratory specimen by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Carbapenem Resistenz Gen (blaKPC) ql. |
| de-DE | German (Germany) | Bakterielle Carbapenem-Resistenz blaKPC-Gen: |
| es-ES | Spanish (Spain) | Gen bla(KPC): |
| es-MX | Spanish (Mexico) | Gen blaKPC de resistencia a carbapenémicos bacterianos: |
| fr-CA | French (Canada) | Gène bactérien de résistance à la carbapéném blaKPC: |
| fr-FR | French (France) | Résistance bactérienne aux carbapénèmases blaKPC gène: |
| it-IT | Italian (Italy) | Resistenza batterica ai carbapenemici, gene blaKPC: Synonyms: Gene blaKPC di resistenza batterica ai carbapenemici Genetica molecolare Isolato o Campione Presenza o Soglia Punto nel tempo (episodio) Suscettibilità agli antibiotici |
| nl-NL | Dutch (Netherlands) | bacteriële carbapenemresistentie blaKPC-gen: Synonyms: isolaat/specimen molgen |
| pt-BR | Portuguese (Brazil) | bla(KPC) gene: Synonyms: Arbitrary concentration; |
| zh-CN | Chinese (China) | 细菌碳青霉烯类耐药 blaKPC 基因: Synonyms: 供检查用的材料; |
Third Party Copyright
This material includes SNOMED Clinical Terms® (SNOMED CT®) which is used by permission of the International Health Terminology Standards Development Organisation (IHTSDO) under license. All rights reserved. SNOMED CT® was originally created by The College of American Pathologists. "SNOMED" and "SNOMED CT" are registered trademarks of the IHTSDO.
This material includes content from the US Edition to SNOMED CT, which is developed and maintained by the U.S. National Library of Medicine and is available to authorized UMLS Metathesaurus Licensees from the UTS Downloads site at https://uts.nlm.nih.gov.
Use of SNOMED CT content is subject to the terms and conditions set forth in the SNOMED CT Affiliate License Agreement. It is the responsibility of those implementing this product to ensure they are appropriately licensed and for more information on the license, including how to register as an Affiliate Licensee, please refer to http://www.snomed.org/snomed-ct/get-snomed-ct or info@snomed.org<mailto:info@snomed.org>. This may incur a fee in SNOMED International non-Member countries.
73982-1 Carbapenem resistance blaNDM gene [Presence] by Molecular method
Term Description
Detection of bla(NDM) genotypes by molecular-based assays in isolates positive for gram-negative bacilli. Test is performed to determine resistance to carbapenems due to NDM (New Dehli metallo-β-lactamase) enzyme production.
Source: Regenstrief LOINC
Part Descriptions
LP173523-4 Bacterial carbapenem resistance blaNDM gene
New Delhi Metallo-beta-lactamase (NDM) is an enzyme that makes bacteria resistant to a broad range of beta-lactam antibiotics, including those in the carbapenem family. NDM-1 presents as the most dominant type. The NDM gene encodes beta-lactamase enzymes called carbapenemases. The most common bacteria that make the NDM enzyme are Gram-negative such as Escherichia coli and Klebsiella pneumoniae, but the gene for NDM can spread from one strain of bacteria to another by horizontal gene transfer.
Copyright Text is available under the Creative Commons Attribution/Share-Alike License. See http://creativecommons.org/licenses/by-sa/3.0/ for details.
Source: Wikipedia, NDM beta lactamases
Fully-Specified Name
- Component
- Bacterial carbapenem resistance blaNDM gene
- Property
- PrThr
- Time
- Pt
- System
- Isolate/Specimen
- Scale
- Ord
- Method
- Molgen
Additional Names
- Short Name
- blaNDM Islt/Spm Ql
- Display Name
- Carbapenem resistance blaNDM gene Molgen Ql (Islt/Spec)
- Consumer Name Alpha Get Info
- Carbapenem resistance blaNDM gene
Basic Attributes
- Class
- ABXBACT
- Type
- Laboratory
- First Released
- Version 2.46
- Last Updated
- Version 2.73
- Change Reason
- The PrThr property is used for LOINC terms whose results are reported using an ordered categorical scale, regardless of whether or not an internal threshold was used to make that determination. This change was approved by the Laboratory LOINC Committee in June 2016.; Corrected Component from "Bacterial carbapenemase resistance" to "Bacterial carbapenem resistance" (because the bacteria are resistant to carbapenem antibiotics by virtue of producing carbapenemase) and removed parentheses around and within the gene name according to recommended nomenclature [PMID: 25249841]; Updated System from "Isolate" and Method from "Probe.amp.tar" according to the new, more sustainable model for LOINC molecular resistance terms [Approved by LOINC Laboratory Committee in June 2018].
- Order vs. Observation
- Both
- Common Test Rank Get Info
- 4995
Example Answer List LL360-9
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Positive Copyright http://snomed.info/sct ID:10828004 Positive (qualifier value) | LA6576-8 | ||
| Negative Copyright http://snomed.info/sct ID:260385009 Negative (qualifier value) | LA6577-6 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 104991-5 | Bacterial resistance panel |
| 97324-8 | Carbapenem resistant bacteria identification and resistance panel by Molecular genetics method |
| 85502-3 | Carbapenemase resistance genes panel by Molecular genetics method |
| 93698-9 | Gram negative bacterial resistance panel by Molecular genetics method |
| 93407-5 | Gram negative blood culture panel by NAA with probe detection in Positive blood culture |
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
| 92958-8 | Respiratory pathogens DNA and RNA panel - Lower respiratory specimen by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Carbapenem Resistenz Gen (blaNDM) ql. |
| de-DE | German (Germany) | Bakterielle Carbapenem-Resistenz blaNDM-Gen: |
| es-ES | Spanish (Spain) | Resistencia bacteriana de carbapenemasas gen (bla (NDM)): |
| es-MX | Spanish (Mexico) | Gen blaNDM de resistencia a carbapenémicos bacterianos: |
| fr-FR | French (France) | Résistance bactérienne aux carbapénèmases blaNDM gène: |
| it-IT | Italian (Italy) | Resistenza batterica ai carbapenemici, gene blaNDM: Synonyms: Gene blaNDM di resistenza batterica ai carbapenemici Genetica molecolare Isolato o Campione Presenza o Soglia Punto nel tempo (episodio) Suscettibilità agli antibiotici |
| nl-NL | Dutch (Netherlands) | bacteriële carbapenemresistentie blaNDM-gen: Synonyms: isolaat/specimen molgen |
| pt-BR | Portuguese (Brazil) | Resistência bacteriana á carbapenemase (bla(NDM)) gene: |
| zh-CN | Chinese (China) | 细菌碳青霉烯类耐药 blaNDM 基因: Synonyms: 供检查用的材料; |
Third Party Copyright
This material includes SNOMED Clinical Terms® (SNOMED CT®) which is used by permission of the International Health Terminology Standards Development Organisation (IHTSDO) under license. All rights reserved. SNOMED CT® was originally created by The College of American Pathologists. "SNOMED" and "SNOMED CT" are registered trademarks of the IHTSDO.
This material includes content from the US Edition to SNOMED CT, which is developed and maintained by the U.S. National Library of Medicine and is available to authorized UMLS Metathesaurus Licensees from the UTS Downloads site at https://uts.nlm.nih.gov.
Use of SNOMED CT content is subject to the terms and conditions set forth in the SNOMED CT Affiliate License Agreement. It is the responsibility of those implementing this product to ensure they are appropriately licensed and for more information on the license, including how to register as an Affiliate Licensee, please refer to http://www.snomed.org/snomed-ct/get-snomed-ct or info@snomed.org<mailto:info@snomed.org>. This may incur a fee in SNOMED International non-Member countries.
85498-4 Carbapenem resistance blaIMP gene [Presence] by Molecular method
Term Description
This term is used to report the carbapenemase resistance bla(IMP) gene, detected in various specimens, including rectal swabs and isolates. It was created for, but is not limited in use to, the GeneXpert Carba-R test kit.
Source: Regenstrief LOINC
Part Descriptions
LP248294-3 Bacterial carbapenem resistance blaIMP gene
Plasmid-mediated IMP-type carbapenemases are currently known to have 17 varieties. Studies have revealed its establishment in Japan in the 1990s in enteric Gram-negative organisms, Pseudomonas species and Acinetobacter species. IMP genes usually co-exist with other resistance genes resulting in multi-drug resistance.
Studies have shown that a high percentage of patients with immunodeficiency and drug resistant nosocomial infections are infected with a VIM or IMP producing organism, particularly when the organism identified is pseudomonas aeruginosa. The two genes are often present together although they can also be present individually. Identifying the presence of these genes is important in monitoring drug resistance and determining the best antibiotic therapy methods.
PMID: 27563634 PMID: 28085553
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Bacterial carbapenem resistance blaIMP gene
- Property
- PrThr
- Time
- Pt
- System
- Isolate/Specimen
- Scale
- Ord
- Method
- Molgen
Additional Names
- Short Name
- blaIMP Islt/Spm Ql
- Display Name
- Carbapenem resistance blaIMP gene Molgen Ql (Islt/Spec)
- Consumer Name Alpha Get Info
- Carbapenem resistance blaIMP gene
Basic Attributes
- Class
- ABXBACT
- Type
- Laboratory
- First Released
- Version 2.61
- Last Updated
- Version 2.73
- Change Reason
- Updated System from "Anorectal/Isolate" and Method from "Probe.amp.tar" according to the new, more sustainable model for LOINC molecular resistance terms [Approved by LOINC Laboratory Committee in June 2018].
- Order vs. Observation
- Observation
- Common Test Rank Get Info
- 4988
Example Answer List LL956-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 | ||
| Equivocal Copyright http://snomed.info/sct ID:42425007 Equivocal (qualifier value) | LA11885-3 | ||
| Inconclusive Copyright http://snomed.info/sct ID:419984006 Inconclusive (qualifier value) | LA9663-1 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 104991-5 | Bacterial resistance panel |
| 97324-8 | Carbapenem resistant bacteria identification and resistance panel by Molecular genetics method |
| 85502-3 | Carbapenemase resistance genes panel by Molecular genetics method |
| 93698-9 | Gram negative bacterial resistance panel by Molecular genetics method |
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
| 92958-8 | Respiratory pathogens DNA and RNA panel - Lower respiratory specimen by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-DE | German (Germany) | Bakterielle Carbapenem-Resistenz blaIMP-Gen: |
| es-ES | Spanish (Spain) | gen bacteriano blaIMP resistente a carbapenem: |
| es-MX | Spanish (Mexico) | Gen blaIMP de resistencia a carbapenémicos bacterianos: |
| fr-FR | French (France) | Résistance bactérienne aux carbapénèmases blaIMP gène: |
| it-IT | Italian (Italy) | Resistenza batterica ai carbapenemici, gene blaIMP: Synonyms: Gene blaIMP di resistenza batterica ai carbapenemici Genetica molecolare Isolato o Campione Presenza o Soglia Punto nel tempo (episodio) Suscettibilità agli antibiotici |
| nl-NL | Dutch (Netherlands) | bacteriële carbapenemresistentie blaIMP-gen: Synonyms: bacterieel carbapenem resistentie blaIMP gen isolaat/specimen molgen |
| zh-CN | Chinese (China) | 细菌碳青霉烯类耐药 blaIMP 基因: Synonyms: 供检查用的材料; |
Third Party Copyright
This material includes SNOMED Clinical Terms® (SNOMED CT®) which is used by permission of the International Health Terminology Standards Development Organisation (IHTSDO) under license. All rights reserved. SNOMED CT® was originally created by The College of American Pathologists. "SNOMED" and "SNOMED CT" are registered trademarks of the IHTSDO.
This material includes content from the US Edition to SNOMED CT, which is developed and maintained by the U.S. National Library of Medicine and is available to authorized UMLS Metathesaurus Licensees from the UTS Downloads site at https://uts.nlm.nih.gov.
Use of SNOMED CT content is subject to the terms and conditions set forth in the SNOMED CT Affiliate License Agreement. It is the responsibility of those implementing this product to ensure they are appropriately licensed and for more information on the license, including how to register as an Affiliate Licensee, please refer to http://www.snomed.org/snomed-ct/get-snomed-ct or info@snomed.org<mailto:info@snomed.org>. This may incur a fee in SNOMED International non-Member countries.
85501-5 Carbapenem resistance blaVIM gene [Presence] by Molecular method
Term Description
This term is used to report the carbapenemase resistance bla(VIM) gene, detected in various specimens, including rectal swabs and isolates. It was created for, but is not limited in use to, the GeneXpert Carba-R test kit.
Source: Regenstrief LOINC
Part Descriptions
LP248277-8 Bacterial carbapenem resistance blaVIM gene
Verona integron-encoded metallo-β-lactamase (VIM) is part of a growing family of carbapenemases and includes at least 10 members. VIMs are one of the most common types of carbapenemases, with many variants in at least 23 species of Gram-negative bacilli from more than 40 regions of the world. PMID: 21449842 Studies have shown that a high percentage of patients with immunodeficiency and drug resistant nosocomial infections are infected with a VIM or IMP producing organism, particularly when the organism identified is Pseudomonas aeruginosa. PMID: 27563634 The two genes are often present together although they can also be present individually. Identifying the presence of these genes is important in monitoring drug resistance and determining the best antibiotic therapy methods. PMID: 28085553
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Bacterial carbapenem resistance blaVIM gene
- Property
- PrThr
- Time
- Pt
- System
- Isolate/Specimen
- Scale
- Ord
- Method
- Molgen
Additional Names
- Short Name
- blaVIM Islt/Spm Ql
- Display Name
- Carbapenem resistance blaVIM gene Molgen Ql (Islt/Spec)
- Consumer Name Alpha Get Info
- Carbapenem resistance blaVIM gene
Basic Attributes
- Class
- ABXBACT
- Type
- Laboratory
- First Released
- Version 2.61
- Last Updated
- Version 2.73
- Change Reason
- Updated System from "Anorectal/Isolate" and Method from "Probe.amp.tar" according to the new, more sustainable model for LOINC molecular resistance terms [Approved by LOINC Laboratory Committee in June 2018].
- Order vs. Observation
- Observation
- Common Test Rank Get Info
- 4996
Example Answer List LL956-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 | ||
| Equivocal Copyright http://snomed.info/sct ID:42425007 Equivocal (qualifier value) | LA11885-3 | ||
| Inconclusive Copyright http://snomed.info/sct ID:419984006 Inconclusive (qualifier value) | LA9663-1 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 104991-5 | Bacterial resistance panel |
| 97324-8 | Carbapenem resistant bacteria identification and resistance panel by Molecular genetics method |
| 85502-3 | Carbapenemase resistance genes panel by Molecular genetics method |
| 93698-9 | Gram negative bacterial resistance panel by Molecular genetics method |
| 93407-5 | Gram negative blood culture panel by NAA with probe detection in Positive blood culture |
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
| 92958-8 | Respiratory pathogens DNA and RNA panel - Lower respiratory specimen by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-DE | German (Germany) | Bakterielle Carbapenem-Resistenz blaVIM-Gen: |
| es-ES | Spanish (Spain) | gen bacteriano blaVIM resistente a carbapenem: |
| es-MX | Spanish (Mexico) | Gen blaVIM de resistencia a carbapenémicos bacterianos: |
| fr-FR | French (France) | Résistance bactérienne aux carbapénèmases blaVIM gène: |
| it-IT | Italian (Italy) | Resistenza batterica ai carbapenemici, gene blaVIM: Synonyms: Gene blaVIM di resistenza batterica ai carbapenemici Genetica molecolare Isolato o Campione Presenza o Soglia Punto nel tempo (episodio) Suscettibilità agli antibiotici |
| nl-NL | Dutch (Netherlands) | bacteriële carbapenemresistentie blaVIM-gen: Synonyms: bacterieel carbapenem resistentie blaVIM gen isolaat/specimen molgen |
| zh-CN | Chinese (China) | 细菌碳青霉烯类耐药 blaVIM 基因: Synonyms: 供检查用的材料; |
Third Party Copyright
This material includes SNOMED Clinical Terms® (SNOMED CT®) which is used by permission of the International Health Terminology Standards Development Organisation (IHTSDO) under license. All rights reserved. SNOMED CT® was originally created by The College of American Pathologists. "SNOMED" and "SNOMED CT" are registered trademarks of the IHTSDO.
This material includes content from the US Edition to SNOMED CT, which is developed and maintained by the U.S. National Library of Medicine and is available to authorized UMLS Metathesaurus Licensees from the UTS Downloads site at https://uts.nlm.nih.gov.
Use of SNOMED CT content is subject to the terms and conditions set forth in the SNOMED CT Affiliate License Agreement. It is the responsibility of those implementing this product to ensure they are appropriately licensed and for more information on the license, including how to register as an Affiliate Licensee, please refer to http://www.snomed.org/snomed-ct/get-snomed-ct or info@snomed.org<mailto:info@snomed.org>. This may incur a fee in SNOMED International non-Member countries.
85827-4 Carbapenem resistance bla OXA-48-like gene [Presence] by Molecular method
Term Description
This test reports the presence of the OXA-48-like bacterial carbapenemase resistance type gene in gram negative bacterial isolates. This term was created for, but is not limited in use to, the submitter's modified protocol for the Check-Points Check-MDR CT103XL assay.
Source: Regenstrief LOINC
Part Descriptions
LP248274-5 Bacterial carbapenem resistance blaOXA-48-like gene
The existence of OXA-48 like class D beta-lactamases has been increasing in enterobacter species organisms. The "OXA-like" groups of genes are molecularly similar to and thought to evolve from the original gene for which the group is named. For example, as of 2014 the blaOXA-23-like group included 19 genes, including including blaOXA-23, -27, -49, and -73. PMID: 24696435. The OXA-48 like class D beta-lactamase enzymes are highly resistant to penicillins and beta lactamase inhibitors and show a low resistance to carbapenems. These varied OXA-48-like beta-lactamases have been identified worldwide, including OXA-48-like producing Klebsiella pneumoniae with resistance to multiple drugs that emerged in Jordanian hospitals. Reports have shown that organisms producing OXA-48 like enzymes are either not resistant to broad-spectrum cephalosporins or show a decreased susceptibility to carbapenemase drugs. Identifying them can be a challenge. Screening and detection is required to prevent and control dissemination. PMID: 22499996 PMID: 26993738
Source: Regenstrief LOINC
Fully-Specified Name
- Component
- Bacterial carbapenem resistance blaOXA-48-like gene
- Property
- PrThr
- Time
- Pt
- System
- Isolate/Specimen
- Scale
- Ord
- Method
- Molgen
Additional Names
- Short Name
- blaOXA-48-like Islt/Spm Ql
- Display Name
- Carbapenem resistance bla OXA-48-like gene Molgen Ql (Islt/Spec)
- Consumer Name Alpha Get Info
- Carbapenem resistance bla OXA-48-like gene
Basic Attributes
- Class
- ABXBACT
- Type
- Laboratory
- First Released
- Version 2.61
- Last Updated
- Version 2.67
- Change Reason
- Updated System from "Isolate" and Method from "Probe.amp.tar" according to the new, more sustainable model for LOINC molecular resistance terms [Approved by LOINC Laboratory Committee in June 2018].
- Order vs. Observation
- Observation
Example Answer List LL360-9
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Positive Copyright http://snomed.info/sct ID:10828004 Positive (qualifier value) | LA6576-8 | ||
| Negative Copyright http://snomed.info/sct ID:260385009 Negative (qualifier value) | LA6577-6 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 104991-5 | Bacterial resistance panel |
| 97324-8 | Carbapenem resistant bacteria identification and resistance panel by Molecular genetics method |
| 85502-3 | Carbapenemase resistance genes panel by Molecular genetics method |
| 93698-9 | Gram negative bacterial resistance panel by Molecular genetics method |
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
| 92958-8 | Respiratory pathogens DNA and RNA panel - Lower respiratory specimen by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-AT | German (Austria) | Synonyms: Carbapenem Resistenz Gen (blaOXA-48-like) ql. |
| de-DE | German (Germany) | Bakterielle Carbapenem-Resistenz blaOXA-48-ähnliches Gen: |
| es-ES | Spanish (Spain) | gen bacteriano similar blaOXA-48 resistente a carbapenem: |
| es-MX | Spanish (Mexico) | Gen de tipo blaOXA-48 de resistencia a carbapenémicos bacterianos: |
| fr-FR | French (France) | Résistance bactérienne aux carbapénèmases blaOXA-48-like gène: |
| it-IT | Italian (Italy) | Resistenza batterica ai carbapenemici, gene blaOXA-48-like: Synonyms: Gene blaOXA-48-like di resistenza batterica ai carbapenemi Genetica molecolare Isolato o Campione Presenza o Soglia Punto nel tempo (episodio) Suscettibilità agli antibiotici |
| nl-NL | Dutch (Netherlands) | bacteriële carbapenemresistentie blaOXA-48-achtig gen: Synonyms: blaOXA-134-like isolaat/specimen molgen |
| zh-CN | Chinese (China) | 细菌碳青霉烯类耐药 blaOXA-48-样基因: Synonyms: 供检查用的材料; |
Third Party Copyright
This material includes SNOMED Clinical Terms® (SNOMED CT®) which is used by permission of the International Health Terminology Standards Development Organisation (IHTSDO) under license. All rights reserved. SNOMED CT® was originally created by The College of American Pathologists. "SNOMED" and "SNOMED CT" are registered trademarks of the IHTSDO.
This material includes content from the US Edition to SNOMED CT, which is developed and maintained by the U.S. National Library of Medicine and is available to authorized UMLS Metathesaurus Licensees from the UTS Downloads site at https://uts.nlm.nih.gov.
Use of SNOMED CT content is subject to the terms and conditions set forth in the SNOMED CT Affiliate License Agreement. It is the responsibility of those implementing this product to ensure they are appropriately licensed and for more information on the license, including how to register as an Affiliate Licensee, please refer to http://www.snomed.org/snomed-ct/get-snomed-ct or info@snomed.org<mailto:info@snomed.org>. This may incur a fee in SNOMED International non-Member countries.
88250-6 Cephalosporin resistance blaCTX-M gene [Presence] by Molecular method
Part Descriptions
LP185698-0 Bacterial cephalosporin resistance blaCTX-M gene
The bacterial (CTX-M) gene is targeted to detect CTX-M type beta lactamases, a group of class A extended-spectrum beta-lactamases (ESBLs) that are a common cause of community-acquired infections. They exhibit powerful activity against cefotaxime and ceftriaxoane. CTX-M type ESBLs are rapidly spreading among Enterobacteriaceae worldwide and replacing TEM-type and SHV-type beta lactamases as the predominant ESBLs in many countries. They originate from Kluyvera species and can be separated into 5 different groups: CTX-M-1, CTX-M-2, CTX-M-9, CTX-M-8, and CTX-M-25. CTX-M2, CTX-M3, and CTX-M14 are the most prevelant. More than 80 CTX-M allotypes are currently known (2014).
Source: Regenstrief LOINC, PMID:18154526
Fully-Specified Name
- Component
- Bacterial cephalosporin resistance blaCTX-M gene
- Property
- PrThr
- Time
- Pt
- System
- Isolate/Specimen
- Scale
- Ord
- Method
- Molgen
Additional Names
- Short Name
- blaCTX-M Islt/Spm Ql
- Display Name
- Cephalosporin resistance bla(CTX-M) gene Molgen Ql (Islt/Spec)
- Consumer Name Alpha Get Info
- Cephalosporin resistance bla(CTX-M) gene
Basic Attributes
- Class
- ABXBACT
- Type
- Laboratory
- First Released
- Version 2.63
- Last Updated
- Version 2.73
- Change Reason
- Removed parentheses from gene name, updated System from "Bld.pos growth" and Method from "Probe" according to the new, more sustainable model for LOINC molecular resistance terms [Approved by LOINC Laboratory Committee in June 2018].
- Order vs. Observation
- Both
- Common Test Rank Get Info
- 4969
Example Answer List LL744-4
| Answer | Code | Score | Answer ID |
|---|---|---|---|
| Detected | LA11882-0 | ||
| Not detected | LA11883-8 |
Member of these Panels
| LOINC | Long Common Name |
|---|---|
| 93698-9 | Gram negative bacterial resistance panel by Molecular genetics method |
| 93407-5 | Gram negative blood culture panel by NAA with probe detection in Positive blood culture |
| 88260-5 | Gram negative blood culture panel by Probe in Positive blood culture |
| 97608-4 | Joint pathogens panel - Synovial fluid by NAA with non-probe detection |
| 92958-8 | Respiratory pathogens DNA and RNA panel - Lower respiratory specimen by NAA with non-probe detection |
Language Variants Get Info
| Tag | Language | Translation |
|---|---|---|
| de-DE | German (Germany) | Bakterielle Cephalosporin-Resistenz blaCTX-M-Gen: |
| de-AT | German (Austria) | Synonyms: Cephalosporin Resistenz Gen (blaCTX-M) ql. |
| es-ES | Spanish (Spain) | gen (bla(CTX-M) Resistencia bacteriana a cefalosporinas: |
| es-MX | Spanish (Mexico) | Gen blaCTX-M de resistencia a cefalosporinas bacterianas: |
| fr-FR | French (France) | Résistance bactérienne aux céphalosporines blaCTX-M gène: |
| it-IT | Italian (Italy) | Resistenza batterica alle Cefalosporine blaCTX-M, gene: Synonyms: Gene di resistenza alle cefalosporine blaCTX-M Genetica molecolare Isolato o Campione Presenza o Soglia Punto nel tempo (episodio) Suscettibilità agli antibiotici |
| nl-NL | Dutch (Netherlands) | bacteriële cefalosporineresistentie (bla(CTX-M)) gen: Synonyms: isolaat/specimen molgen |
| zh-CN | Chinese (China) | 细菌头孢菌素耐药 blaCTX-M 基因: Synonyms: M 型 供检查用的材料; |